Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0004 ATGGAGACGAGCATGATGACAGTTTTTCATGTTGTTGCCATTTTTCTTCTCCTATCAGATTCAGACCCTTTTGCTGTTGTGAATGCAAACTCTGAAGGTGATGCTCTGTTCGCGTTCAGAAGAGCAGTGAAAGACCCAAATAACGTTCTACAGAGCTGGGATCCAACTTTGGTTGATCCTTGTACATGGTTCCATGTTACCTGTGATGATGATAAGCGAGTTACACGACTAGACCTCGGACACGCAAATCTGTCTGGCCATTTGGTTCCAGAGCTAGGGAGGCTCCAGCGCCTGCAGTTTCTAGAACTGTACAAGAATGATTTGATGGGTCCAATACCAAAGGAACTTGGAGACCTCAAGAACCTGGTTAGCTTGGGTCTCTACCAGAATAACCTCACTGCCTCTATCCCCATCACCCTGTCCAACCTATCAAACATCAAATTCTTGCGACTCAACAGCAACAAGCTCACTGGAAGAATACCGAGGGAACTCACTAAGTTGAGAAACCTCAAGATCTTAGACCTATCAAACAATGATCTATGTGGTACTTTCCCGACATCCGCCTCCTTTTCCAAGTTCTCCGAAGAAAGTTTCAAGAATAATCCAAGACTTAAAGGACCAGAATTAATGGGATTCGTCAGATATGATACTGGAGAAAGCTGCAAATGA 669 0.4425 METSMMTVFHVVAIFLLLSDSDPFAVVNANSEGDALFAFRRAVKDPNNVLQSWDPTLVDPCTWFHVTCDDDKRVTRLDLGHANLSGHLVPELGRLQRLQFLELYKNDLMGPIPKELGDLKNLVSLGLYQNNLTASIPITLSNLSNIKFLRLNSNKLTGRIPRELTKLRNLKILDLSNNDLCGTFPTSASFSKFSEESFKNNPRLKGPELMGFVRYDTGESCK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0004 222 Pfam Leucine rich repeat 121 180 IPR001611 GO:0005515
Aed3g0004 222 SUPERFAMILY L domain-like 31 193 - -
Aed3g0004 222 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 13 221 - -
Aed3g0004 222 Gene3D Ribonuclease Inhibitor 28 211 IPR032675 -
Aed3g0004 222 PANTHER LRR AMINO-TERMINAL DOMAIN PROTEIN 13 221 - -
Aed3g0004 222 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0004 Aed-Chr3 51221 55260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0004 1 207 Receptor kinase-like Gene Family AT1G71830 56.522 9.52e-71 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0004 - - gmx:100778819 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0004 3 51221 55260 Aed3g0004 3 51221 55260 ECH