Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2379 ATGGCGAGGAAGAAGATCAGAGAGTACCACTCGAAGAGGCTCCTGAAGGAGCACCTGAAACGACTCGCCTCTATCGATCTCGACATCCTCTCAGCTCAGGTCACAGAATTAACGGACTTCACCGACTTGACAGACCAGCAGCCGTGGCTTTCGTCAACCAAACTGGTCGTGAAGCCCGACATGCTGTTCGGGAAGCGTGGCAAGAGTGGCTTAGTGGCTCTCAATCTCGACGTAGCTCAAGTCGCCGAATTCGTTAAAGCGCGCCTCGGCGCAGAGGTTGAGATGGGAGGTTGCAAGGCGCCTATAACTACTTTCATCGTCGAACCGTTCGTCCCTCACGACCAAGAGTATTATCTCTCCGTTGTTTCTGATAGGCTCGGCTCCACCATCAGCTTCTCCGAATCTGGCGGCATCGAAATTGAAGACAATTGGGATAAGGTCAAAACTATATTCCTTCCCACGGAAAAACCGTTGACTCCCGAGGCATGTGCGCCGTTGATTGCTACACTTCCTTTGGAGATTCGGGGGACAATTGGTGATTTCATATTGGGTGTGTTTGCTGTCTTCCAAGATCTGGACTTCAGTTTTCTAGAGATGAATCCATTTACACTGGTGAACGAAAAGCCATATCCACTGGATATGCGAGGGGAATTGGATGACACTGCTGCATTTAAGAACTTCAACAAGTGGGGTAATATAGAGTTTCCATTGCCTTTTGGAAGAGTTCTGAGCCCTACAGAAAGCTTCATTCATTCCTTGGATGACAAGACAAGTGCATCATTGAAATTTACTGTATTGAACCCAAAAGGACGCATCTGGACGATGGTAGCAGGAGGTGGTGCGAGTGTAATTTATGCTGATACTGTTGGAGATTTAGGCTATGCATCAGAGCTTGGTAACTATGCTGAGTATAGTGGAGCTCCGAATGAAGAGGAGGTGTTGCAGTATGCAAGAGTTGTAATTGATTGTGCTACTGCAGACCCTGATGGCCGTAAGAGAGCCCTTCTTATTGGAGGTGGCATAGCAAACTTCACTGATGTTGCTGCCACATTCAGCGGGATTATTCGAGCGCTGAAAGAGAAGGAATCAAAGCTTAAAGCAGCACGAATGCACATCTATGTCAGAAGAGGTGGTCCAAACTACCAGACTGGTTTGTCAAAGATGCGTGCATTGGGGGAGGAATTGGGAGTACCAATTCAGGTTTATGGACCGGAGGCCACCATGACGGGTATCTGCAAACAAGCTATTGATTGCATCATTTCCGAAGCATAA 1272 0.478 MARKKIREYHSKRLLKEHLKRLASIDLDILSAQVTELTDFTDLTDQQPWLSSTKLVVKPDMLFGKRGKSGLVALNLDVAQVAEFVKARLGAEVEMGGCKAPITTFIVEPFVPHDQEYYLSVVSDRLGSTISFSESGGIEIEDNWDKVKTIFLPTEKPLTPEACAPLIATLPLEIRGTIGDFILGVFAVFQDLDFSFLEMNPFTLVNEKPYPLDMRGELDDTAAFKNFNKWGNIEFPLPFGRVLSPTESFIHSLDDKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRALKEKESKLKAARMHIYVRRGGPNYQTGLSKMRALGEELGVPIQVYGPEATMTGICKQAIDCIISEA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2379 423 Pfam ATP-grasp domain 6 203 IPR013650 -
Aed2g2379 423 Pfam ATP citrate lyase citrate-binding 241 417 IPR032263 -
Aed2g2379 423 Gene3D - 240 422 IPR016102 -
Aed2g2379 423 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 3 1 423 - -
Aed2g2379 423 SUPERFAMILY Succinyl-CoA synthetase domains 259 403 IPR016102 -
Aed2g2379 423 Gene3D - 1 233 - -
Aed2g2379 423 PANTHER ATP-CITRATE SYNTHASE 1 423 - -
Aed2g2379 423 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2379 Aed-Chr2 26963883 26967600 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2379 1 420 Acyl Lipid Metabolism Gene Families AT1G09430 87.619 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2379 K01648 - gmx:100787551 806.594