Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2349 ATGATGGTGACAAGTGAGCTACAAGGATTTTCCTTTTCCATGTCCCTGGGTTCAAAGAAGCCATCCTATCTGTCTTCCTCATTCTCTGGTAGCAGAGTGAACTTGCTTCATTCAAAGAATGTAGCATCTGGTTTTCCTCCAGGAAAATTCTCTAGTGTTACGCAGAGAAACACAACCAGAAGACTTTTGGTTACTTCTACTCTTGCAGATGTTGCAAATGACTTTATGGCTCTTCAATCACCAATACTTACAGGAAGAGAAACCAACCCAAAGACTGTTGCATCGATCATATTAGGTGGTGGAGCTGGAACTCGTCTATTCCCCCTCACTGAAAGAAGGGCTAAACCTGCTGTGCCATTTGGAGGATGCTATAGGCTGGTGGACATACCAATGAGTAATTGTATTAACAGTGGAATTAACAAAATATACGTCCTTACACAATTTAATTCTCAGTCCCTAAATCGCCACATTGCTCGAACATATAATTTGGGAGGTTGCATCAACTTTGGAGGTGGTTTTGTTGAGGTACTGGCAGCAACTCAAACACCTGGGGATTCAGGAAAGAAGTGGTTTCAGGGTACAGCCGATGCTGATGCTGAACATAAAAATATAGAAAACATTCTGATATTGTGCGGTGATCAGCTCTACCGAATGGATTACATGGAAATTGTGCAGAAACACATTAATTCATGTGCTGATATATCAGTATCTTGTCTCCCAGTGGATGGCAGTCGGGCCTCTGATTTTGGATTAGTGAAGGTTGATGAAAGAGGACAGATACGCCAGTTCCTTGAAAAACCCAAGGGCGAATTGTTAAGATCTATGCATGTAGATACAAGTATATTTGGACTATCACCTCAAGAAGCAAGGAAATTTCCATACATTGCATCAATGGGTATATATGTATTTAAAATAGATGTTCTACTAAAAGTTCTCAGGGGCTGTTATCCTAATGCAAATGATTTTGGATCCGAAGTCATTCCAAGGGCTGCAAAAGATTTTAATGTCCAGGCATGTCTTTTCAGTGGTTATTGGGAAGATATTGGGACAATAAAATCTTTCTTTGATGCGAACTTGGCTCTTATGGACCAGCGGCCCAAGTTTCAGTTGTATGACCAGTCCAAGCCTATTTTTACATGTCCTCGGTTCCTACCTCCAACTAAAATGGACAAGTGTGAGGTAATTAACTCTTTGATTTCAGATGGTTGCTTTTTAAAAGAGTGCACAATTGAACATTCCATTGTGGGAATCCGATCAAGACTTGATTCTGGAGTGCAGCTAAAGAATGTGCAGGAAGCAGAAAGACCATCAGAGGGGTTTTATATTCGATCAGGAATAACTGTGGTGTTAAAAAACTCTGTAATAAGCAATGACACTATCATTTAA 1386 0.4033 MMVTSELQGFSFSMSLGSKKPSYLSSSFSGSRVNLLHSKNVASGFPPGKFSSVTQRNTTRRLLVTSTLADVANDFMALQSPILTGRETNPKTVASIILGGGAGTRLFPLTERRAKPAVPFGGCYRLVDIPMSNCINSGINKIYVLTQFNSQSLNRHIARTYNLGGCINFGGGFVEVLAATQTPGDSGKKWFQGTADADAEHKNIENILILCGDQLYRMDYMEIVQKHINSCADISVSCLPVDGSRASDFGLVKVDERGQIRQFLEKPKGELLRSMHVDTSIFGLSPQEARKFPYIASMGIYVFKIDVLLKVLRGCYPNANDFGSEVIPRAAKDFNVQACLFSGYWEDIGTIKSFFDANLALMDQRPKFQLYDQSKPIFTCPRFLPPTKMDKCEVINSLISDGCFLKECTIEHSIVGIRSRLDSGVQLKNVQEAERPSEGFYIRSGITVVLKNSVISNDTII 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2349 461 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 4, CHLOROPLASTIC/AMYLOPLASTIC 5 429 - -
Aed2g2349 461 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 4, CHLOROPLASTIC/AMYLOPLASTIC 429 461 - -
Aed2g2349 461 CDD ADP_Glucose_PP 96 348 - -
Aed2g2349 461 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 99 118 IPR005836 GO:0005978|GO:0008878
Aed2g2349 461 SUPERFAMILY Trimeric LpxA-like enzymes 381 460 IPR011004 -
Aed2g2349 461 Pfam Nucleotidyl transferase 95 362 IPR005835 GO:0009058|GO:0016779
Aed2g2349 461 Gene3D Hexapeptide repeat proteins 383 428 - -
Aed2g2349 461 Gene3D Hexapeptide repeat proteins 429 461 - -
Aed2g2349 461 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 296 306 IPR005836 GO:0005978|GO:0008878
Aed2g2349 461 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 5 429 IPR011831 GO:0005978|GO:0008878
Aed2g2349 461 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 429 461 IPR011831 GO:0005978|GO:0008878
Aed2g2349 461 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 81 382 IPR029044 -
Aed2g2349 461 SUPERFAMILY Nucleotide-diphospho-sugar transferases 92 407 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2349 Aed-Chr2 26745223 26748778 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2349 K00975 - gmx:100805739 816.609