Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2348 ATGGGTTGGAGTGGACGATGTCTCAAAAGCATGGTGTTAATGATTGCTTTTATTGTTGTTCAACATGTGAAGTGTGGAGACTCATCATCAGCTCGCATATTGCTTCAGCATGGTGGTGGGTTCGTTCAAAGAAGTGGCACCAATTTCGTAGTGAATAACAGACGTTTCTACTTCAACGGATTCAACGCGTACTGGCTAATGTACATGGCATCTGACCCAGCCACAAGGCCCAAGGTTAGTGCCATTTTGCAACAAGCTTCCAGCCATGGCTTAACTGTTGCTAGAACCTGGGCTTTCAATGATGGAGCTGCTTACAGAGCCCTTCAACTCTCTCCTGGTTCCTACGACGAGAATGTATTCAGGGGATTGGACTTTGTGGTATCAGAAGCGGGAAAACATGGGGTGCGTTTGATACTGAGCTTGGTGAACAACTGGAAAGATTTTGGAGGGAAAAATCAGTACGTGGAATGGGTGAAGAATGGAGGACAGTACGTGAACAGTGAAGATGATTTCTTTTCACATCCTGTTGCTAAGCAACACTACAAAAACCATATTAAGGCTGTGCTGACAAGAAAAAACACAATAACAGGGGTGGCATACAAGGACGATCCTGCCATATTTGCGTGGGAACTTATGAATGAACCCCGTTCCCAACACGACAACTCCGGGAAAGTTATTCAGCAATGGGTGATTGAGATGGCTGGCTACGTCAAATCCATCGATAGCAAACACTTGTTGGAAATAGGACTGGAAGGGTTCTATGGTGAAACAGAGAAAAAACAATTCAATCCTGGGTACCAACTTATTGGTACTGATTTCATTTCTAACAACCTTGTTCACCAAGTCGATTTTGCTACCATGCATCTCTACCCTGAACAATGGTTGGCAGGCTCAAACGAAGCTGCTCAGGTTGCATTTGTTGACAAATGGTTAAAAACACATATTGAAGATGCCAAAAATGTTCTGGGGAAGCCTATAGTTGTTGGTGAGTTTGGGAAATCTTTGAAGTCATATAGTGTGGTTGAAAGGGACAGTTACATAAGCAAAATGTATAATGCGATATACAGTAGTGCTAGTAGTGGGGGACCCTGTGCTGGTGGCCTCTTTTGGCAGCTCATGGCTCAAGGAATGGATGGTTTCCGTGATGGTTATGAAGTTATTTTCGAAGAGAGTCCTTCAACTACCAGAATTATAGACCAGCAATCCCACAAGATGTCAACTATTGCTTAG 1230 0.4366 MGWSGRCLKSMVLMIAFIVVQHVKCGDSSSARILLQHGGGFVQRSGTNFVVNNRRFYFNGFNAYWLMYMASDPATRPKVSAILQQASSHGLTVARTWAFNDGAAYRALQLSPGSYDENVFRGLDFVVSEAGKHGVRLILSLVNNWKDFGGKNQYVEWVKNGGQYVNSEDDFFSHPVAKQHYKNHIKAVLTRKNTITGVAYKDDPAIFAWELMNEPRSQHDNSGKVIQQWVIEMAGYVKSIDSKHLLEIGLEGFYGETEKKQFNPGYQLIGTDFISNNLVHQVDFATMHLYPEQWLAGSNEAAQVAFVDKWLKTHIEDAKNVLGKPIVVGEFGKSLKSYSVVERDSYISKMYNAIYSSASSGGPCAGGLFWQLMAQGMDGFRDGYEVIFEESPSTTRIIDQQSHKMSTIA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2348 409 PANTHER - 11 408 IPR045053 GO:0004553
Aed2g2348 409 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 11 408 - -
Aed2g2348 409 SUPERFAMILY (Trans)glycosidases 41 399 IPR017853 -
Aed2g2348 409 Pfam Cellulase (glycosyl hydrolase family 5) 71 353 IPR001547 GO:0004553|GO:0071704
Aed2g2348 409 Gene3D Glycosidases 39 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2348 Aed-Chr2 26740894 26745507 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2348 8 408 Glycoside Hydrolase AT5G66460 52.840 2.58e-151 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2348 K19355 - gmx:100787923 735.717