Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2263 TCTGTTCATCACAAATCTAAGGAACCTGAAGAATCTTTGGGTTCCGCCATTCCAGCCAACCAGGCTCTCATTGTCTCTGCCGCCGCCGCTGGCAAACAAAAAATCATAATCATAACAATGGATGCTCTGTGTTTACACAGTAGCATTTATGGGTCTATTCCCATTCCCATTACTGCAACTGCACGCGCCAATGATTACGCCTTACACTCTCCGGTCACCGCCGTGTGCCCGCGCTCCTCCTTCTCTTTTAGATGCCCTTCGAAGTCTTTTTGGCCACCACCTACTGGGAATGCCTCCGCCGGCTACAATGGTCTCTCCGTCGTCGACGACGCCGTTTTGGCAGAGAATGCAACGGTGGAAACAGAACAACGAGAAGGAGAAGGAGAGGGACGAAATGGGAACTGGGTTTTTAAGATTTTTCATATAAGGTCTGTTTGGCGAGGGCAACAGAGAAGCCATGATAACGATGACGAGGAAGCTCTGGCCAATGATCAAACTGATGAAGACTGTGATGGTTGCAGGGTTGATTATGATGATGATGACGAAGAAAAAGAAGACAGTGAAGAGGTTTCCTTCGATAGAGACTCATTTTCGAGAATGCTTCGGAGGGTGTCATTGGCCGAATCTAGATTATATGCGCGCATTTCCCACTTGGGCAATTTGGCTTACTCTATTCCACAAATCAATCCAGCGAAACTCTTCAAACATTATGGTCTGCGTTATGTAACTTCATCCATAGAGAAGAAAAAACTAGCTGTGGCAGCAGAAAAAAACCAGACAACATCTGCTACAACTCAGAAAGAAGAAACTAATAACGAGGAGGATGTGAGAGAAACAAAAGAGGGAAAGAACCGTGGATACATAGTAAGTGCATCTGCTGCATACGAGATTGCTGCTTCTGCTGCCTCTTATCTCCATGCTCAGACAAAGAGCATGCTTCCATTCAAATCTTGTTCTGCTGCTGAAGGTGAAGGTTCAATTGAAGCAAGAAATGAAAGCTTTAACGGCGATAAGACGAGAAACACGGAGGAGGCAGCTTTGAAGGCAACTACCGATTCGGTAACAGCAGTTGTTGCTGCAAATGAGCAAGTAAAGCAGGCTTTTGCAGATGATTTGAACTCAACAGGCTCTTCACCCTGTGAATGGTTCGTATGCGATGATGACCAGACCTCTACAAGATATTTTGTGATCCAGGGCTCTGAGTCGTTTGCATCATGGCAAGCAAACCTACTATTTGAACCAATTCAATTTGAGGGGTTAGATGTCCATGTACATAGAGGTATATACGAGGCTGCAAAAGGGACATATCGACATATGTTGCCAGAAATTCGTGCTCACCTAAAATCCCATGGTTCACGTGCAACATTCCGTTTCACTGGTCATTCTCTTGGGGGAAGCTTGGCCTTACTTGTAAATCTAATGCTACTGATAAGGAACGAAGCTCCATTATCCTCTCTGCTTCCTGTCATAACTTTTGGAGCTCCATCCATCATGTGTGGAGGTGACAATCTACTTGACATGCTAGGATTGCCACGCAGTCATGTTCAGGCAATCACAATGCACAGAGATATAGTACCACGAGCATTCTCTTGCCAGTATCCTAACCACATTGCAGAACTACTCAAGGCTGTTAATGGAAACTTCCGCAATCATCCTTGCCTTAATAATCAGAAGCTATTATATGCACCAATGGGTGAAATGCTGATCCTACAGCCAGATGAGAATTTTTCACCAAGTCATGATCTGCTGCCCTCAGGCAGTGGTCTATATCTTTTGAATGGTTGTTTATCAGCAGAATCTAGTGAGACATTAAAAAAACAGATTCAGAAAGCTCAAATGGTTTTCTTGAACACACCACACCCACTTGAGATATTAAGTGACCGATCTGCCTATGGATCTGGAGGGAACATTCAGAGAGATCATGACATGAATTCCTACTTAAAATGTGTGAGAACCATGATTCGCCAAGAACTTAACCAGATTCGCAAGGCAGGGAGAGAGCAAAGGCGAAATGTGTGGTGTCCTCTTGTGCTGCCACGTGGAAGTGACACACACATAGTTCTTGGGGGTTCCATGATTCAAGATCAGCCTTCCTTATCTGGCATCATTAAGACAGGTGGAGACTCATTGAAAATGTTCAATAGGCTTGTTGCATCCCAACACATGCAATTGTTTCTAGTGTTCCTGTTTCCTGCACGGTTGCTACTCGTGGGAGCATGTAACTTAATTAATTAG 2235 0.4452 SVHHKSKEPEESLGSAIPANQALIVSAAAAGKQKIIIITMDALCLHSSIYGSIPIPITATARANDYALHSPVTAVCPRSSFSFRCPSKSFWPPPTGNASAGYNGLSVVDDAVLAENATVETEQREGEGEGRNGNWVFKIFHIRSVWRGQQRSHDNDDEEALANDQTDEDCDGCRVDYDDDDEEKEDSEEVSFDRDSFSRMLRRVSLAESRLYARISHLGNLAYSIPQINPAKLFKHYGLRYVTSSIEKKKLAVAAEKNQTTSATTQKEETNNEEDVRETKEGKNRGYIVSASAAYEIAASAASYLHAQTKSMLPFKSCSAAEGEGSIEARNESFNGDKTRNTEEAALKATTDSVTAVVAANEQVKQAFADDLNSTGSSPCEWFVCDDDQTSTRYFVIQGSESFASWQANLLFEPIQFEGLDVHVHRGIYEAAKGTYRHMLPEIRAHLKSHGSRATFRFTGHSLGGSLALLVNLMLLIRNEAPLSSLLPVITFGAPSIMCGGDNLLDMLGLPRSHVQAITMHRDIVPRAFSCQYPNHIAELLKAVNGNFRNHPCLNNQKLLYAPMGEMLILQPDENFSPSHDLLPSGSGLYLLNGCLSAESSETLKKQIQKAQMVFLNTPHPLEILSDRSAYGSGGNIQRDHDMNSYLKCVRTMIRQELNQIRKAGREQRRNVWCPLVLPRGSDTHIVLGGSMIQDQPSLSGIIKTGGDSLKMFNRLVASQHMQLFLVFLFPARLLLVGACNLIN 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2263 744 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 70 742 IPR043367 GO:0008970
Aed2g2263 744 SUPERFAMILY alpha/beta-Hydrolases 377 563 IPR029058 -
Aed2g2263 744 CDD Lipase_3 349 527 - -
Aed2g2263 744 MobiDBLite consensus disorder prediction 268 282 - -
Aed2g2263 744 MobiDBLite consensus disorder prediction 255 282 - -
Aed2g2263 744 Gene3D alpha/beta hydrolase 336 564 IPR029058 -
Aed2g2263 744 Pfam Lipase (class 3) 395 532 IPR002921 GO:0006629
Aed2g2263 744 MobiDBLite consensus disorder prediction 160 189 - -
Aed2g2263 744 MobiDBLite consensus disorder prediction 150 189 - -
Aed2g2263 744 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 70 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2263 Aed-Chr2 26147979 26150913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2263 40 744 Acyl Lipid Metabolism Gene Families AT1G02660 53.469 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2263 - - gmx:100788786 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2263 2 26147979 26150913 Aed2g2263 2 26147979 26150913 ECH
Aed2g2263 2 26147979 26150913 Aed8g0673 8 5858938 5863379 PCT