Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2217 ATGCCATCGTCTTCGGGGTTGATTTTCAGAGGGCACGAGTCCCAACCACTGGACGACGCCTATTACCCGAAGCCGCAGAAGCCATGGCTCTCCTTCCGCTACCTCCTCCGCGAACAGCGTCTCTACTTTCTCCTAGTCGGCGTTTTCCTCGCCACTCTCTTCTTCTTCTTCCTCCTCCCATCATCATCGTCCTCTCCTCCCCTCTCTAGTTACAAGCCCACTGCCCGCTGGCCCAGCAATACCGGCCGAAGCTACGACGTCATGTCGTCGGTGCATTCCGTGGGGAAGGTCCCCCTCGGGATTAAGCGCAAGGGCCTCCGGATCGTTGTCACCGGTGGGGCCGGCTTCGTCGGGTCCCACTTGGTGGATCGCTTGATTGCCCGGGGAGACAGCGTAATTGTCGTTGACAATTTCTTCACGGGAAGGAAGGAAAACGTTATGCACCATTTTGGCAACCCCAACTTCGAGCTCATCCGACACGACGTCGTTGAGCCTCTCTTGTTAGAGGTCGACCAGATCTACCATCTCGCTTGCCCCGCCTCCCCCGTCCATTACAAGTTCAATCCAACGAACGTGGTGGGAACGTTGAATATGTTGGGGCTAGCTAAAAGAGTGGGCGCCAGGTTCTTGTTAACCAGTACCAGTGAGGTTTACGGAGATCCTCTGGAACACCCTCAGAAGGAGACTTACTGGGGTAACGTCAATCCCATCGGTGTTCGAAGCTGCTATGACGAGGGAAAGCGTACAGCTGAGACGTTGGCCATGGATTACCACAGAGGAGCTGGTGTCGAGGTGAGAATAGCTAGGATTTTCAACACCTACGGGCCACGCATGTGCTTAGATGATGGTCGTGTTGTTAGTAACTTCGTTGCTCAGGCACTAAGAAAGGAGCCTTTGACCGTTTATGGGGATGGCAAGCAGACTAGGAGTTTCCAATATGTTTCTGATTTGGTGGAGGGGCTGATGCGCCTTATGGAAGGAGAACATGTTGGACCTTTCAATCTTGGAAATCCGGGTGAATTCACCATGCTTGAACTTGCCAAGGTGGTACAAGAAACAATTGATCCAGAGGCTAAGATAGAGTACAGGCCCAACACAGAGGATGACCCACACAAGAGAAAGCCTGATATTAGTAGAGCTAAGGAGCTACTGGGCTGGGAGCCCAAGGTGGACCTACACAATGGACTCCCTCTAATGGTTTCTGACTTCCGACAACGCATTTTTGGGGACCAAAAAGAGGAAACAAGAACAACCTCTGCCTAA 1263 0.5265 MPSSSGLIFRGHESQPLDDAYYPKPQKPWLSFRYLLREQRLYFLLVGVFLATLFFFFLLPSSSSSPPLSSYKPTARWPSNTGRSYDVMSSVHSVGKVPLGIKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGVRSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPEAKIEYRPNTEDDPHKRKPDISRAKELLGWEPKVDLHNGLPLMVSDFRQRIFGDQKEETRTTSA 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2217 420 Pfam GDP-mannose 4,6 dehydratase 110 397 IPR016040 -
Aed2g2217 420 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 5 416 IPR044516 GO:0042732|GO:0048040|GO:0070403
Aed2g2217 420 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 104 408 IPR036291 -
Aed2g2217 420 CDD UGD_SDR_e 107 404 - -
Aed2g2217 420 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE 4 5 416 - -
Aed2g2217 420 Gene3D - 224 408 - -
Aed2g2217 420 Gene3D - 102 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2217 Aed-Chr2 25885535 25888979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2217 48 400 Miscellaneous Gene Families AT1G02000 26.923 1.48e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2217 K08678 - gmx:100809832 733.021