Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2203 ATGCTTCCTCTCTCCCTTCTCAAGACTGCCCAAGGCCACCCTATGTTGGTGGAACTGAAAAATGGAGAGACTTATAACGGTCATTTGGTCAATTGCGATACATGGATGAACATCCATCTCCGAGAAGTCATTTGTACCTCTAAAGACGGAGATAGATTTTGGAGGATGCCTGAATGCTACATACGAGGCAATACAATCAAGTACCTTCGAGTTCCTGATGAGGTTATTGACAAAGTTCAAGAAGAAACCAAGAGCCGTGCAGGTAAGGCATTGTTTTGGCATTTAGTTGGTTGGTATGAGTTTGAGTGTAAGTATGTATATATCGCAAACCACCTGGTGTGGGTCGTGGAAGGGGAAGAGCCAGAGAGGAAGGTCCTGGTGGACGCCCATCAAAAGGAATTGGACGTGGTCTTGATGATGGTGGTGCCAAGGGAGCTGGAGGAGGCCGAGGCAGGGGTGGTCCCAGTGGAAAGCCTGGCGGAAACAGAGGGCGAGGTAGAGGCTGATTCTAACAAGTTACTTCAGATGTGCCCAGTTGGCTACTTTCGGAGTCCTTAG 558 0.4857 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRAGKALFWHLVGWYEFECKYVYIANHLVWVVEGEEPERKVLVDAHQKELDVVLMMVVPRELEEAEAGVVPVESLAETEGEVEADSNKLLQMCPVGYFRSP 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2203 185 Pfam LSM domain 6 70 IPR001163 -
Aed2g2203 185 Gene3D - 1 83 - -
Aed2g2203 185 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 89 IPR027141 GO:0006396
Aed2g2203 185 PANTHER SM-LIKE PROTEIN LSM4 1 89 - -
Aed2g2203 185 CDD LSm4 2 77 IPR034101 GO:0000398|GO:0000956
Aed2g2203 185 SMART Sm3 5 71 IPR001163 -
Aed2g2203 185 SUPERFAMILY Sm-like ribonucleoproteins 3 84 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2203 Aed-Chr2 25805595 25808831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2203 K12623 - oeu:111369840 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2203 2 25805595 25808831 Aed2g2203 2 25805595 25808831 ECH