Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2201 ATGTTAGAGAAGTGTTTGGGAGTTCAAAGGGCGCGAAGATTCCATAGAGCTCTCAGGCATTGCAAGTTAACGATCCTCTGTCTCATTCTCACCGTGGTTGTCCTGCGCGGCACCATTGGCGCCGGAAAATTCGGCACGCCGGGGCAGGACTTCGTCGACATTCGCGACCGCATTTACCCCCGTAAGCTCCCCGAACCCCATCGCCTCCTCGGCGAGCTCCATTCCACGACGTCGTTTTCATCTTCCGTCAATTCCACTTCCACCAACAATTACAACGCCTTCGACATCAACACCATTTTGGTCGACGAAAAAGAAGACGAGAAACTCGACCCGCACCAGCCGTATCGTCTCGGCCCCAAAATCTCCAACTGGGACGAACAGAGATCTCGTTGGCTTCGCGAGAATCCCAATTTCTCGAATTTCCTTCGACCCAACAAGCCCCGCGTGCTTCTCGTAACTGGGTCGTCGCCGAAACCGTGCGAGAATCCCGTTGGGGATCATTACTTGTTGAAGAGTGTTAAGAACAAAATCGATTATTGTCGTTTGCATGGGATTGAGGTGTTTTACAACATGGCTCTCCTCGACGCTGAAATGGCAGGGTTTTGGGCGAAGCTTCCTTTGATAAGGAAGCTTCTTTTGTCGCACCCTGAGGTGGAGTTTCTATGGTGGATGGATAGTGATGCCATGTTCACGGACATGGCGTTTGAGGTGCCGTGGGAGAGATATAAAGACTCTAACTTTGTGATGCATGGGTGGAATGAGATGGTTTATGATGACAAGAATTGGATTGGGTTAAACACTGGGAGTTTTTTGTTGAGGAATTGTCAGTGGTCTTTGGATATTCTTGATGCTTGGGCTCCAATGGGGCCCAAAGGGAAGGTTAGGGATGAGGCGGGGAAAGTGCTGACGCGTGAGCTCAAGGATAGGCCTGTTTTTGAAGCTGATGATCAATCTGCGATGGTTTATTTGCTGGCTAAGGAGAGGGACAAGTGGAGTGGGAAGGTTTATCTTGAGAATGGTTATTACTTGCATGGTTATTGGGGGATTTTGGTTGATAGGTATGAGGAGATGATTGAGAATTATCACCCTGGTTTTGGTGACCATAGGTGGCCATTGGTGACTCATTTCGTGGGGTGCAAGCCTTGTGGGAAATTTGGGGATTACCCGGTTGAGAGGTGCTTGAAGCAGATGGATAGGGCTTTTAATTTTGGGGATAATCAGATACTGCAGATTTATGGGTTCACGCATAAGTCGTTGGCTAGTAGGGGAGTTAAGAGAATACGGGATGAGACTAGCAATCCTCTTGAGGTCCAAGATGAACTTGGGTTGCTTCATCCAGCGTTTAAAGCAGTTGAGGTATCATGA 1365 0.4872 MLEKCLGVQRARRFHRALRHCKLTILCLILTVVVLRGTIGAGKFGTPGQDFVDIRDRIYPRKLPEPHRLLGELHSTTSFSSSVNSTSTNNYNAFDINTILVDEKEDEKLDPHQPYRLGPKISNWDEQRSRWLRENPNFSNFLRPNKPRVLLVTGSSPKPCENPVGDHYLLKSVKNKIDYCRLHGIEVFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDSNFVMHGWNEMVYDDKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDEAGKVLTRELKDRPVFEADDQSAMVYLLAKERDKWSGKVYLENGYYLHGYWGILVDRYEEMIENYHPGFGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQIYGFTHKSLASRGVKRIRDETSNPLEVQDELGLLHPAFKAVEVS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2201 454 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 145 298 IPR029044 -
Aed2g2201 454 Pfam galactosyl transferase GMA12/MNN10 family 146 385 IPR008630 GO:0016021|GO:0016757
Aed2g2201 454 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE-RELATED 4 454 - -
Aed2g2201 454 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 454 IPR008630 GO:0016021|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2201 Aed-Chr2 25798027 25799391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2201 1 454 Glycosyltransferase AT4G02500 80.306 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2201 K08238 - gmx:100794266 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2201 2 25798027 25799391 Aed2g2201 2 25798027 25799391 ECH