Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2170 ATGAGCAGCCACAGCCAGAACACGAACACGAACACCAAGACCAACAACAACAACAACGTTGATGGAGGAGGAGCTCAGGTCGAGAGGCCCTACCATCTCTTGCTGCGCTTTCTTGCCCTCTCCCTCACTCTAGTAGCAACCATCATTGTTGGTGTTGACAATGAGACCAAACTCATCTCCTACGCCGAAATGCAATTCAAAGCCACTGCTAAGTGGGAATATGTCTCTGCTATGGTGTATTTCTTGGTGATAAACGCGATAGCATGTTCATACGCTGCTGCGACTTTGGTTATCACGTTGATGGCAAGAAGCAGAAGAAATAAGAAGAATAGTGATGATGTGACAGTTTTGGGGGTAACAGCGCTAGATCTTGTGATGGTGGCTTTCTTGTTCTCAGCCAATGGTGCAGCCTGTGCAGTGGGAGTCATAGCACAGAAGGGGAACTCGCACGCTCAATGGATGAAACTCTGCAACGTCTTTGACTCCTATTGTCGCCACGTCACTGCTGCATTGGTCCTCTCTATCATTGCCTCCACCGTCTTTCTCTTGCTCGTCCTCCATTCTCTTCTCAAACTCCATTACAGAACAACAACAACAACAACAACCTAG 609 0.4778 MSSHSQNTNTNTKTNNNNNVDGGGAQVERPYHLLLRFLALSLTLVATIIVGVDNETKLISYAEMQFKATAKWEYVSAMVYFLVINAIACSYAAATLVITLMARSRRNKKNSDDVTVLGVTALDLVMVAFLFSANGAACAVGVIAQKGNSHAQWMKLCNVFDSYCRHVTAALVLSIIASTVFLLLVLHSLLKLHYRTTTTTTT 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2170 202 PANTHER CASP-LIKE PROTEIN 1E1 14 195 - -
Aed2g2170 202 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 14 195 - -
Aed2g2170 202 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 33 191 IPR006459 -
Aed2g2170 202 MobiDBLite consensus disorder prediction 1 23 - -
Aed2g2170 202 Pfam Casparian strip membrane protein domain 31 179 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2170 Aed-Chr2 25614127 25615359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2170 - - gmx:100817307 265.774