Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2159 ATCCAGAGTCAACTGCAATATCCTCCGGTGTATGAGTCAACATTTGAGCTATTTTTTGGGGCAGAAAATCATGTTAAGAATGGTTCCTACATTTCATATTCAAGGGCTTTGTTTGCTGAGAGCTTCCACAGGTTATTGTCTACTCAGGCTGCTGGAGGTAATGGAGCCAAGGTTATTATTGCTGATATTCACCAACAACTTGGCCAAGAGACTGCAAAAGAACTAGGACCTAATGCTACTTTCATAACATGTGATGTCACTCAAGATGTCACAGGTGTGATGGGAGGGGTGGCCCAGCACACTTACTCAATCTCCAAGTTTGCAGTTACTGGCATTGTTAAATCTCTGGCTTCTGAGCTATGCAGGCATGGAATCAGAGTCAATTGCATATCACCTTTTGCCATCCCCACTGCTTTTGTTATGGGAGAAATGAATCAGATGTATCCTCATGTTGATGCTCAGAGACATGTGGACATTGTTCACAATGCTGGTGTGCTAAATGGAGTGAATTGTGAACCCAATGATGTTGCTAATGCTGCACTTTTCCTTGCATCTGATGATGCCAAGTATGTTAGTGGACACAACTTGGTTGTGGATGGAGGTTTCACTTCTTTTAAGAATTTGGAATTTCCTGCACCAGATCAAGTGGAGTAG 654 0.4266 IQSQLQYPPVYESTFELFFGAENHVKNGSYISYSRALFAESFHRLLSTQAAGGNGAKVIIADIHQQLGQETAKELGPNATFITCDVTQDVTGVMGGVAQHTYSISKFAVTGIVKSLASELCRHGIRVNCISPFAIPTAFVMGEMNQMYPHVDAQRHVDIVHNAGVLNGVNCEPNDVANAALFLASDDAKYVSGHNLVVDGGFTSFKNLEFPAPDQVE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2159 217 Gene3D - 38 88 - -
Aed2g2159 217 Pfam Enoyl-(Acyl carrier protein) reductase 94 203 - -
Aed2g2159 217 Gene3D - 89 207 - -
Aed2g2159 217 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 53 203 IPR036291 -
Aed2g2159 217 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 54 89 - -
Aed2g2159 217 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 89 214 - -
Aed2g2159 217 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 89 117 IPR020904 GO:0016491
Aed2g2159 217 PRINTS 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 182 201 IPR003560 GO:0008667|GO:0019290
Aed2g2159 217 PRINTS 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 117 140 IPR003560 GO:0008667|GO:0019290
Aed2g2159 217 PANTHER ALCOHOL DEHYDROGENASE-LIKE PROTEIN 54 89 - -
Aed2g2159 217 PANTHER ALCOHOL DEHYDROGENASE-LIKE PROTEIN 89 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2159 Aed-Chr2 25557426 25559836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2159 74 204 Miscellaneous Gene Families AT4G05530 31.343 4.83e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2159 - - ccaj:109796618 241.121