Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2142 ATGGCGGTTTCCGAAGAAGAATGCTCTTCTGCGAAGCCAGGCCCCTCTTCTTCGTCTTCCGCCGCTTCGCGCTACTACCTCTCCAAGTGCGTTCTCAGAGGTAGCGTCGTTCTTCAGGTCCTCCACGCTCACATCCGTTCTCCTTCCTCAAACGACGTCGTTTTCGGCAAGGAGACATCTATTGAATTGGTGGTTATTGATGAGGATGGGAATGTGCAATCTGTGTGTGATCAGCCTGTCTTTGGCACCATCAAAGATCTTGCCATTTTGCCCTGGAATGAGAAATTTCGCGCACGTGATCAGCAGCTGTGGGGTAAAGACCTTTTGGTTGCTACATCTGATTCCGGGAAGCTGTCGTTGCTCACATTTTGCAATGAAATGCACAGGTTTGTTCCTGTAACACAAATTCGGCTATCTAATCCTGGAAACATAATGGATCTTCCTGGAAGAAAGCTAGCAGTTGATTCAAGGATCTTTTTTGCTCAACTCCAGAGAATTGTGTATCCTTCTGAAAGTGAAGGGACTGCAAGTACTTCCAGAAGCATCCCAAGAACCGGTATACATGGTACTATTTGGAGCATCTGCTTCATTTCACAAGATTCCAGACAACCAAGCAAGGAGCATAATCCTGTACTAGCTGTTATTATAAATAGGAGGGGAGCGCTTCTAAATGAATTGCTATTATTGGAATGGAATGTTAAAGCATGTAAAATGTTTGTTATTTCTCAGTATGTTGAAGCTGGGCCTCTAGCACATGACATTGTTGAAGTTCCCAACTCCAGGGGACTTGCATTTCTATTCAGAGCTGGTGATATTCTCTTAATGGATCTTAGAGATCCTCGCAACCCATCCTGTGTCTGTAAGACTAACTTGAACTTTTTACCCAATGCCATGGAAGAGCAGACTTATGTGGAAGACTCTTGTAAATTACACGATGTTGATGATGAACGCTTTAGTGTTGCTGCCTGTGCTTTGTTGGAGCTGAGTGATTATGATCCTATGTGCATAGACAGTGACAATGGTGGTGCTAATTCAGGTTACAAATACGTATGCTCGTGGAGTTGGGAACCTGAAAATAATAGAGATCCTAGGATTATCATTTGTGTAGATACTGGGGAATTTTTTATGATTGAAGTTCTTTTTGATTCTGATGGCCCTAAAGTTAATTTGTCTGAGTGTCTCTATAAAGGTCTACCCTGTAAAGCACTTTTGTGGGTTGAAGGTGGATATCTAGCTGCCCTTGTGGAAATGGGGGATGGTGTGGTCCTGAAATTGGAAGATGGAAGGCTGTGCTATACAAACCCTATTCAAAACATTGCACCAATTTTGGATATGGAAGTTGTAGATTATCATGATGAAAAGCATGATCAAATGTTTGCTTGCTGTGGTGTGGCACCAGAGGGGTCATTAAGGATTATTCGAAATGGTATTAATGTGGAAAATCTACATAGGACTGCTTCTATATATCAAGGGGTAACTGGTACTTGGACTGTCCGAATGAAAGTTACGGATTTACACCATTCTTTTCTAGTTTTATCGTTTGTTGAGGAAACCAGAATATTATCAGTTGGCTTAAGTTTTACCGATGTGACTGATTCAGTTGGTTTCCAACCTAATGTCTGTACTTTGGCATGCGGCCTTGTGACTGATGGTTTGCTTGTTCAGATACACCAATCTACTGTTAAGCTTTGTTTGCCCATTAAGGCGGCTCATTCTGAAGGTATCCCTTTGTCCTCTCCTATTTGCACATCTTGGTCTCCAGACAATGTGAGTATCAGTTTGGGAGCAGTTGGACATAATTTCATAGTTGTGTCAACCTCTAACCCATGCTTTCTGTTTATCCTTGGGGTTAGATTGCTATCAGCTTATCAATATGAAATTTATGAAATGCAACATTTGGTACTGCAGAATGAATTATCATGCATTTCCATCCCTGGACAAGAAATTGAGCAAAAACAATCAAATTCATCCATTTCAGCCAATAATAGTAGCATCTCTTCTTTTCAAAGTGGAGTGGACATCAACAAAACCTTTGTTATTGGCACACATAGGCCTTCTGTGGAAATTTGGTTTTTCGCTCCAGGTGGAGGAATTACAGTTGTTGCTTGTGGGACAATTTCATTAACGAATACAATGGGGACTGCCATAAGTGGTTGTGTACCTCAAGATGTACGGCTTGTATTTGTTGATAAGTATTATGTTCTTGCTGGATTGAGGAATGGAATGCTCCTTCGCTTTGAGTGGCCTGTGGAATCTTGTCCTTCATCACCAATAAATATGGTGGATACTGCTTTATCTTCTATAAATTTGGTTAATTCTGTGACTAATGCTTTTGACAAGAGAAATGACCTTCCATCCATGCTTCAATTGATTGCCATTCGACGCATTGGCATTACTCCAGTTTTCCTGGTGCCCCTGGGTGACACACTGGATGCTGATATAATTGCTCTTAGTGATAGGCCTTGGTTGTTGCATAGTGCAAGACACAGCCTTTCCTATACTTCTATCTCTTTTCAACCATCAACACATGTAACTCCTGTTTGCTCTGTTGAGTGTCCAAAAGGAATATTATTTGTTGCAGAAAACAGTTTACACCTGTTATTGTTCCTATTTTTTGGGAGTAGGGAGGATAATGTCACACCCATGGGACTCGCCTCCAATACATGTATACATGAGAAGGAGGTGGAGATGGTCCACAGCAAGAGACTTAATATGCAGAAGTTTCATTTAGAGGGCACTCCACGGAAGGTCCTTTATCACAATGAAAGCAAGATGTTGCTTGTGATGAGGACTGAACTGAATTGTGGTACATGTTTGTCTGACATATGTTGTGTGGATCCCCTAAGTGGGTCAGTACTGTCGTCTTTTAGACTTGAACTTGGAGAAACAGGAAAATCCATGGCATTAGTAAGAGTTGGAAGTGAGCAGGTGCTTGTTGTTGGAACTAATCTGTCTTCTGGTCCACCCACAATACCCAGTGGTGAAGCTGTAAGTTGCAAGGGTCGTCTTCTTGTTCTCTGTCTTGATCATGTGCAAAATTCAGATAGTGGTTCAATGACGTTCTGTTCAAAGGCAGGGTCATCATCTAAAAAAACTTCACCATTCCATGAAATTGTTACATATGTTCCTGAACAGTTATCGAGCAGTAGCCTTGGCAGCAGTCCTGATGATAATAGTTCTGATGGCATCAAACTTGATGAAAATGAAGTATGGCAGTTTCGATTGGCTTATGCAACTAAATGGCAGGGAATTGTACTTAATATCTGTCCGTATCTTGATCGTTACTTCTTGGCATCTGCTGGCAATGCTTTCTATGTTTGTGGTTTCCCTAATGACAACGCTCAAAGAGTGAAAAGGTATGCTATGGGAAGGACGCATTACCTGATAACATCTTTGACTGCACATTTTACTAGAATTGCAGTTGGTGATTGTCGTAATGGTATCCTTTTATATTCTTATCACGAGGAAGCAAAAAAATTGGAGCTACTTTACAATGACCCATCACATAGAGTAGTTGCTGATTGCATTCTCATGGATGCTGATACGGCTGTTGTTTCGGATCGTAAAGGAAGCATTGCTGTTTTATGTTCAGATCACTTGGAAGGTGGACAATGCAACATGACACTAAGCTGTGCTTATTTCACAGCTGAGATAGCCATGAGCATCAAGAAGGGTTCATATTCATACAGACTTCCAGCTGATGATGTTTTGCAAGGTGGAAATGGCCCCAAGACAAATTTTGATTCATTACAAAATACTATCATTGCCAGTACCCTGTTAGGAAGCATAATGATCTTCATCCCTTTATCAAGGGAAGAATATGAGCTCTTAGAAGCAGTGCAAGCAAGACTTGTTGCTCATCATTTGACAGCGCCTGTTCTAGGAAATGATCATAATGAGTTTCGCAGTCGCGAAAATCAGGTTCGAGTACCCAAGATACTTGATGGTGACATGTTGACCCAGTTTCTGGAGCTGACAAGTATGCAGCAAAATATGATTTTGTCGTCAGAGCCACCGGATATGGTAAAACCAAGTTTGAAGCCCCTCCTAACCTCCCATGTTTCTGTAAATCAGGTGGTTCAACTTCTTGAACGAGTCCATTATGCTCTGAACTAA 4116 0.4147 MAVSEEECSSAKPGPSSSSSAASRYYLSKCVLRGSVVLQVLHAHIRSPSSNDVVFGKETSIELVVIDEDGNVQSVCDQPVFGTIKDLAILPWNEKFRARDQQLWGKDLLVATSDSGKLSLLTFCNEMHRFVPVTQIRLSNPGNIMDLPGRKLAVDSRIFFAQLQRIVYPSESEGTASTSRSIPRTGIHGTIWSICFISQDSRQPSKEHNPVLAVIINRRGALLNELLLLEWNVKACKMFVISQYVEAGPLAHDIVEVPNSRGLAFLFRAGDILLMDLRDPRNPSCVCKTNLNFLPNAMEEQTYVEDSCKLHDVDDERFSVAACALLELSDYDPMCIDSDNGGANSGYKYVCSWSWEPENNRDPRIIICVDTGEFFMIEVLFDSDGPKVNLSECLYKGLPCKALLWVEGGYLAALVEMGDGVVLKLEDGRLCYTNPIQNIAPILDMEVVDYHDEKHDQMFACCGVAPEGSLRIIRNGINVENLHRTASIYQGVTGTWTVRMKVTDLHHSFLVLSFVEETRILSVGLSFTDVTDSVGFQPNVCTLACGLVTDGLLVQIHQSTVKLCLPIKAAHSEGIPLSSPICTSWSPDNVSISLGAVGHNFIVVSTSNPCFLFILGVRLLSAYQYEIYEMQHLVLQNELSCISIPGQEIEQKQSNSSISANNSSISSFQSGVDINKTFVIGTHRPSVEIWFFAPGGGITVVACGTISLTNTMGTAISGCVPQDVRLVFVDKYYVLAGLRNGMLLRFEWPVESCPSSPINMVDTALSSINLVNSVTNAFDKRNDLPSMLQLIAIRRIGITPVFLVPLGDTLDADIIALSDRPWLLHSARHSLSYTSISFQPSTHVTPVCSVECPKGILFVAENSLHLLLFLFFGSREDNVTPMGLASNTCIHEKEVEMVHSKRLNMQKFHLEGTPRKVLYHNESKMLLVMRTELNCGTCLSDICCVDPLSGSVLSSFRLELGETGKSMALVRVGSEQVLVVGTNLSSGPPTIPSGEAVSCKGRLLVLCLDHVQNSDSGSMTFCSKAGSSSKKTSPFHEIVTYVPEQLSSSSLGSSPDDNSSDGIKLDENEVWQFRLAYATKWQGIVLNICPYLDRYFLASAGNAFYVCGFPNDNAQRVKRYAMGRTHYLITSLTAHFTRIAVGDCRNGILLYSYHEEAKKLELLYNDPSHRVVADCILMDADTAVVSDRKGSIAVLCSDHLEGGQCNMTLSCAYFTAEIAMSIKKGSYSYRLPADDVLQGGNGPKTNFDSLQNTIIASTLLGSIMIFIPLSREEYELLEAVQARLVAHHLTAPVLGNDHNEFRSRENQVRVPKILDGDMLTQFLELTSMQQNMILSSEPPDMVKPSLKPLLTSHVSVNQVVQLLERVHYALN 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2142 1371 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 107 644 IPR018846 -
Aed2g2142 1371 Gene3D - 477 869 IPR015943 GO:0005515
Aed2g2142 1371 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR (CPSF) A SUBUNIT PROTEIN 20 867 - -
Aed2g2142 1371 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR (CPSF) A SUBUNIT PROTEIN 887 1368 - -
Aed2g2142 1371 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 20 867 - -
Aed2g2142 1371 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 887 1368 - -
Aed2g2142 1371 MobiDBLite consensus disorder prediction 1 21 - -
Aed2g2142 1371 Pfam CPSF A subunit region 942 1324 IPR004871 GO:0003676|GO:0005634
Aed2g2142 1371 Gene3D - 875 1267 IPR015943 GO:0005515
Aed2g2142 1371 Coils Coil 1370 1371 - -
Aed2g2142 1371 Gene3D - 1270 1367 - -
Aed2g2142 1371 Gene3D - 36 437 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2142 Aed-Chr2 25440612 25452989 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2142 K12830 - gmx:100806799 2388.99