Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2130 ATGAAATTCGGATCTGCATTCAGAGAGTACCTGCAGGAAGAGCGAGAGTGGCTGGTGGACGAGAAATGTGCCCACGTTGAATATATAAGGCTAAAGAAAGTGTTGAAGAGTTGCCAGAAAGATGCCTCCTCTGATAATAACAACAAGGACCAGTTATGTCACTGTCAGTCTTGCCCATTGTGTGATCAAAAGTTCTTCTCTGAGTTGATGAAGGAAGCATCAGATGTAGTAGGATACTTTAGTTCAAGAGTTAAGAATCTCCTTCATCTTCATATTGCAACAGGAATGCAGAGATATGTATTGCGTTTGCGCCAGTGCTTTAAAAACGATAGGCAAGCCCTTACCCAACAAGGGAGGATTCTAATTGAGTACATTGCAATGAATGCTATTGCAATGAGGAAAATACTTAAGAAATATGATAAAGTACACAGCTCTGTGAATGGAGAGAATTTTAAATCTAGGATGCATGCTGAACACATTGAACTTTTGCATTCACCTTGGCTAATTGAATTGGGGGCTTTTTATCTGAATTCTAGTGGACTAGATAGTTGTGAGCTTGATGGACTCTATGGTTGCTTTTCATGTGATCTAAATATAACTAAAGCTGCAATGACATTGATTCTTCCCGATTCTATTAAACTCGAGTACAATCTAACTTGTGCAATTTGCCTGGATTTTGTTTTCAACCCATATGCTTTGAGTTGTGGTCATATCTTCTGCAAGTCATGTGCTTGCTCAGCTGCCTCTGTGATGATTTTTCAAGGCCTTAAAGCTGCTACTCCAGAGTCGAAATGTCCTATATGCAGAGAGGTTGGAGTTTATTCTAAGGCTGTGCGTATGTTAGAACTTGATCTGCTTGTGAAAAGAAGGTGCAAAGACTATTGGAAAGAGAGGCTAGCTGCTGATAGAGTTGATACGTTGAAGCAATCTAAGGAATACTGGAGTTTACAGTCCACATATTCAATTGGATTGCTGTAG 978 0.3978 MKFGSAFREYLQEEREWLVDEKCAHVEYIRLKKVLKSCQKDASSDNNNKDQLCHCQSCPLCDQKFFSELMKEASDVVGYFSSRVKNLLHLHIATGMQRYVLRLRQCFKNDRQALTQQGRILIEYIAMNAIAMRKILKKYDKVHSSVNGENFKSRMHAEHIELLHSPWLIELGAFYLNSSGLDSCELDGLYGCFSCDLNITKAAMTLILPDSIKLEYNLTCAICLDFVFNPYALSCGHIFCKSCACSAASVMIFQGLKAATPESKCPICREVGVYSKAVRMLELDLLVKRRCKDYWKERLAADRVDTLKQSKEYWSLQSTYSIGLL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2130 325 ProSitePatterns Zinc finger RING-type signature. 235 244 IPR017907 -
Aed2g2130 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 201 318 IPR013083 -
Aed2g2130 325 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1-LIKE-RELATED 1 323 - -
Aed2g2130 325 SUPERFAMILY RING/U-box 212 271 - -
Aed2g2130 325 CDD SPX_BAH1-like 2 148 - -
Aed2g2130 325 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 323 IPR033326 -
Aed2g2130 325 Pfam RING-type zinc-finger 220 244 IPR027370 -
Aed2g2130 325 SMART ring_2 220 268 IPR001841 -
Aed2g2130 325 ProSiteProfiles SPX domain profile. 1 153 IPR004331 -
Aed2g2130 325 ProSiteProfiles Zinc finger RING-type profile. 220 269 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2130 Aed-Chr2 25384728 25387534 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2130 K16275 - gmx:100781704 615.535