Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2015 ATGGGCAACGCTCAGTCACCTCCCAATAGTGATCCTCGATATGTTTCAGCAACCAGAGCTTTTACTCCAAAGGAACTTGAAGACTTGAACTCTCTCTTTAATCATCTCGCAACTCAATCCCAGACCAACGCCAATCACATCTCTCCCTCCGTTTTTCAGTCATATTTTGGACTTCATGGCCCTCTTGGGGAGAGGATGTTTGATTTAGTTACTGAGGAGCGCAAGGATCAGAGGTTAACCTTTCAAGACCTCGTTCTTGCTAAAGCTACTTATGAGAAAGGAACGAAAGATGAAATTGAAGAATTCATCTTTCGCTTATTAGATGTATCTGGAGATAACTTTGTAGGGAGGTCTGATTTGGAAACTGTTATGATTGCCATTTTTAATGATATATTATGCATAAAAGGTTCTGAGGATATATCAAATTCACATCAGGACATTGTCAACATATTTCTTAATGCTGCAAAATTCTCCATACATAATGAAGGGGGCACTGAGGAGACTATGTCTTTTGAAGATTTTAGAAGCTGGTGTACTCATCTCCCGTCTGTGAGGAAGCTTCTTGGGAGCCTTCTTTTGCCACCTGATTCAGGACGACCTGGTTCTCAGATTCCTAAACTATTGACTTTGAAGGCTATTGATTCTAACATTATACTTTTGAGAAAGGAATATGCTTGGCATATTGGAGGTGCACTTTCACACCAAGACCTGGAAGATTGGAACCTTTTGTATCATAGTTCTGTTAATGGTCTTAGTTTTAATACATTCATAGGCAACATTTCAAATCATGCAGGCCCAACTGTGTTAATTATTAAGGATAAAGAGGGTTATATATATGGAGGGTATGCTTCTCAACCATGGGAGCGGCATGCTGATTTTTACGGAGACCTGAAATGTTACCTTTTTCAACTATATCCAGTGGCATCTATATTCAGGCCAACTGGAGCAAACAATAATCTACAATGGTGCGCTATCAACTTCACATCAGAGGACATTCCAAATGGCATTGGTTTTGGAGGACGAGTGAACCACTTGGGTTTGTTTATATCAGCAAATTTTGATCAAGGACACACATTTTCTTGTACCACGTTTGGAAGCCCTTGCCTCTCCAAGACTAACCGTATATTGCCAGAAGTAATAGAATGCTGGGGAGTAGCCACTCAAGATGCGACACAAGACAAGAATGATGCTGTCAAAGGCACTATTTTGGAGAGGTTCAAGGAAGATCGCAATATGCTCAAAATGGTAGGGTTGGCAAATTCCAGCGAGTAA 1272 0.4057 MGNAQSPPNSDPRYVSATRAFTPKELEDLNSLFNHLATQSQTNANHISPSVFQSYFGLHGPLGERMFDLVTEERKDQRLTFQDLVLAKATYEKGTKDEIEEFIFRLLDVSGDNFVGRSDLETVMIAIFNDILCIKGSEDISNSHQDIVNIFLNAAKFSIHNEGGTEETMSFEDFRSWCTHLPSVRKLLGSLLLPPDSGRPGSQIPKLLTLKAIDSNIILLRKEYAWHIGGALSHQDLEDWNLLYHSSVNGLSFNTFIGNISNHAGPTVLIIKDKEGYIYGGYASQPWERHADFYGDLKCYLFQLYPVASIFRPTGANNNLQWCAINFTSEDIPNGIGFGGRVNHLGLFISANFDQGHTFSCTTFGSPCLSKTNRILPEVIECWGVATQDATQDKNDAVKGTILERFKEDRNMLKMVGLANSSE 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2015 423 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 415 - -
Aed2g2015 423 SUPERFAMILY EF-hand 6 191 IPR011992 -
Aed2g2015 423 Pfam TLD 242 385 IPR006571 -
Aed2g2015 423 ProSiteProfiles TLDc domain profile. 218 386 IPR006571 -
Aed2g2015 423 ProSitePatterns EF-hand calcium-binding domain. 108 120 IPR018247 -
Aed2g2015 423 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 415 - -
Aed2g2015 423 Gene3D - 3 190 - -
Aed2g2015 423 ProSiteProfiles EF-hand calcium-binding domain profile. 95 130 IPR002048 GO:0005509
Aed2g2015 423 SMART 109ultra 219 386 IPR006571 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2015 103 422 EF-hand Containing Proteins AT5G06260 60.559 6.58e-149 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2015 - - gmx:100804508 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2015 2 24594945 24599107 Aed2g2015 2 24594945 24599107 ECH