Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1994 ATGGGAACCATCGACTTACAATTTATCTTCATATACACTTTTCTTTTTTTTTTCTATTTCTTTCTCTTATTTTCGATGGTTCTCCCAGAGTGTCGCAGCATATCTCTAGTTTTTTTCTCCGTTATTGTGTTGTTACTGATCAACAATGGTGCTGAAGCTTTTCATAAAATATATCCTCATCTTCAATCTATTTCAACTATTTCCGTGACCGGACAGCACAAAACTGGATATCATTTTCAACCTCCTAAGAACTGGATCAATGATCCAAATGGGCCTATGTACTACAATGGAATCTACCATTTATTCTATCAATACAACCCCAAAGGCTCAGTATGGGGTAACATTGTGTGGGCTCACTCTGTGTCAAAGGATCTCATCAACTGGAACGCCGTTGAACCCGCCATTTATCCATCCAAACCATTTGACAAGTTTGGATGTTGGTCTGGCTCAGCCACCATTGTCCCAGGTAAAGGACCTGTGATCCTCTACACCGGAATTATCGACGAAAAACAAACTCAAGTCCAATGCTACGCCGTACCCGAAGACCCAAGCGATCCACTTCTCCGAAAATGGGTTAAACCCGACAAATACAACCCAATCCTGGTTGGTGATAACGGTGTGAACGGTAGTGCATTCCGCGACCCGACGACGGCGTGGTGGAGCAGCAAGGACAAACACTGGAGGATATTGGTGGGCAGTAAAAGAAAGCATAGAGGAATATCTTATCTGTATAGAAGCAAGGACTTCATGACATGGGTTAAGGCCAAACACCCGATCCATTCCAAGGCTGGAACCGGAATGTGGGAGTGCCCCGATTTTTATCCGGTTTCGGTTAGTGGCACCCAAGGGTTGGACACGTCCGTGGAGGGGAATAATAATGTGAAACACGTGTTGAAGAATAGTCTTGACCTTACTAGGTATGATTACTATACCTTGGGAACATATGATAAGGATAGATATGTCCCGGATAACACTTCGGAGGATGGTTGGGGTGGACTTAGATATGACTATGGTAATTTCTATGCTTCAAAGTCGTTTTTTGACCCTAGTAAGAACCGAAGGGTCTTGTGGGGTTGGGCTAACGAGTCTGACAGCAAGGAAGATGATGTTCGTAAAGGATGGGCAGGAATTCAGGCTGATGTGGACGTTACATTCTCAATTGCAAGCTTGGAGAAGGCAGAGGAATATGATCCTAAGTGGGTAAATGCAGAGGACCTCTGTGCCCAAAAGGGTTCAAAAGTTGAAGGTGGGGTTGGACCATTTGGGCTTCTCACATTAGCTTCTCAAAATCTAGAGGAGTTCACTCCTGTTTTTTTCAGAATTTTCAAAGCTCCAAATAAGCATGTGGTTCTCTTGTGCTCAGATGCAAGAAGTTCCTCTTTGAAGAGTAATTTGTACAAGCCATCTTTTGCTGGCTTTGTAGACGTGGATTTGACCACCAATAAGAAACTCTCTCTTAGGAGTTTGATTGATCACTCAGTAGTGGAGAGTTTTGGAGAAGGAGGAAAGACAAACATTTTGTCACGGGTTTATCCACAGTTAGCAGTGTTGAATCAAGCTCACTTGTTTGTGTTCAACAACGGAACTGAACCCATCACGGTGGAAAAACTAACAGCTTGGAGCATGAAATCAGCTGAAATAAATTGA 1647 0.4323 MGTIDLQFIFIYTFLFFFYFFLLFSMVLPECRSISLVFFSVIVLLLINNGAEAFHKIYPHLQSISTISVTGQHKTGYHFQPPKNWINDPNGPMYYNGIYHLFYQYNPKGSVWGNIVWAHSVSKDLINWNAVEPAIYPSKPFDKFGCWSGSATIVPGKGPVILYTGIIDEKQTQVQCYAVPEDPSDPLLRKWVKPDKYNPILVGDNGVNGSAFRDPTTAWWSSKDKHWRILVGSKRKHRGISYLYRSKDFMTWVKAKHPIHSKAGTGMWECPDFYPVSVSGTQGLDTSVEGNNNVKHVLKNSLDLTRYDYYTLGTYDKDRYVPDNTSEDGWGGLRYDYGNFYASKSFFDPSKNRRVLWGWANESDSKEDDVRKGWAGIQADVDVTFSIASLEKAEEYDPKWVNAEDLCAQKGSKVEGGVGPFGLLTLASQNLEEFTPVFFRIFKAPNKHVVLLCSDARSSSLKSNLYKPSFAGFVDVDLTTNKKLSLRSLIDHSVVESFGEGGKTNILSRVYPQLAVLNQAHLFVFNNGTEPITVEKLTAWSMKSAEIN 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1994 548 Gene3D Glycosyl hydrolase domain; family 43 82 384 IPR023296 -
Aed2g1994 548 SUPERFAMILY Concanavalin A-like lectins/glucanases 367 545 IPR013320 -
Aed2g1994 548 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE PROTEIN 378 547 - -
Aed2g1994 548 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE PROTEIN 27 379 - -
Aed2g1994 548 CDD GH32_Fruct1-like 84 379 - -
Aed2g1994 548 Gene3D - 385 547 - -
Aed2g1994 548 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 27 379 - -
Aed2g1994 548 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 378 547 - -
Aed2g1994 548 SUPERFAMILY Arabinanase/levansucrase/invertase 69 379 IPR023296 -
Aed2g1994 548 ProSitePatterns Glycosyl hydrolases family 32 active site. 78 91 IPR018053 GO:0004553|GO:0005975
Aed2g1994 548 Pfam Glycosyl hydrolases family 32 C terminal 374 541 IPR013189 -
Aed2g1994 548 Pfam Glycosyl hydrolases family 32 N-terminal domain 78 379 IPR013148 -
Aed2g1994 548 SMART glyco_32 78 502 IPR001362 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1994 Aed-Chr2 24419539 24424093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1994 50 542 Glycoside Hydrolase AT2G36190 60.000 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1994 K01193 - gmx:100799008 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1994 2 24419539 24424093 Aed2g1994 2 24419539 24424093 ECH