Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1965 ATGATGATAGAGGGTTGTAGCAAGTCCCTTATGGCGTTCCCAATCCTTCTATGGTTCCTTCTGTTCCCACAGCCCTTACTTTGTGATGAGAACAACAATTTTGTTCGTCAAGCAGCTGGTCAAGTCATCATCACACCACACCAACGCTCCCATTCGGAACCCCAACAGGTGCACATTTCATTGGTGGGGAAAGAGAGTATGAGGGTGTCGTGGGTAACCCAAGACAAGCACGCGGAATCTGTGGTGGAGTACGGAACAGAGGCAAGGGAATACACCACAAAAGCAACGGGGGTGCATACCTCGTACCAATACTTTTTCTACAACTCCGGCAAGATCCACAACGTTGTCATTGGGCCTCTGCAGCCAAACATGACTTACTTCTACAGGTGCGGAGGCTCGGGCCCTCAGTTTTCCTTCAAGACACCTCCACCCAACTTGCCCATTCAATTCGTCATCATTGGAGACTTGGGACAAACTGAATGGACTGCATCAACCTTAAAACACGTTGACAGCAGCGACTATGACGTGTTCTTGTCACCGGGAGACCTCTCCTATGCAGATTCGCAACAACCTTTGTGGGACTCATTTGGTCGTTTGGTGGAGCCATACGCTAGTAAAAGGCCATGGATGGTTACCGAAGGTAACCACGAGATTGAGACTTTCCCAATTATTTACCCGCAAGGCTTCCAAGCCTACAACGCTCGCTGGCCCATGCCCTTCCAACAAAGTGGTTCCACCTCGAACCTCTATTACTCCTTCGAGGTTGCCGCCACCCACGTCATCATGCTAGGTTCCTACACTGATTTTCACGCCCAATCGCTGCAGTACACGTGGCTTCAATCTGACCTCGCCAACGTTGACAGGGTCAACAAACCTTGGGTCATTGTTCTGTTGCATGCACCTTGGTATAACACTAATGAGGCACACCAAGGTGAAGGGGAGTCCATGAGACAAGCCATGGAGGAGTTGCTTTATCAGGCTCGCGTTGACTTGGTTTTTGCTGGCCATGTTCATGCATATGAACGCTTCACTCGAATTTACGACAATAAGGCTGACTCGTGTGGACCGATGTTTAAGAACCCTCCAAGCCCACTCTCGTTGTACCGTGAGCCAAGCTTTGGACATGGAAGGTTGCGAATACTAAATGAAACACATGCATATTGGTCATGGCACCGCAACAATGACGCTGATGCAGTTGTAGCTGATGGTGTTTGGATACAGAGTTTAACTAGCTCAAAAGCATGCTCCAAGACACCAAACCAACAAGATGTTGCTAAGGAAGAGCTATGA 1290 0.4899 MMIEGCSKSLMAFPILLWFLLFPQPLLCDENNNFVRQAAGQVIITPHQRSHSEPQQVHISLVGKESMRVSWVTQDKHAESVVEYGTEAREYTTKATGVHTSYQYFFYNSGKIHNVVIGPLQPNMTYFYRCGGSGPQFSFKTPPPNLPIQFVIIGDLGQTEWTASTLKHVDSSDYDVFLSPGDLSYADSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIETFPIIYPQGFQAYNARWPMPFQQSGSTSNLYYSFEVAATHVIMLGSYTDFHAQSLQYTWLQSDLANVDRVNKPWVIVLLHAPWYNTNEAHQGEGESMRQAMEELLYQARVDLVFAGHVHAYERFTRIYDNKADSCGPMFKNPPSPLSLYREPSFGHGRLRILNETHAYWSWHRNNDADAVVADGVWIQSLTSSKACSKTPNQQDVAKEEL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1965 429 PANTHER PURPLE ACID PHOSPHATASE 5 420 - -
Aed2g1965 429 Pfam Iron/zinc purple acid phosphatase-like protein C 359 396 IPR025733 -
Aed2g1965 429 SUPERFAMILY Metallo-dependent phosphatases 147 395 IPR029052 -
Aed2g1965 429 CDD MPP_PAPs 147 408 IPR041792 -
Aed2g1965 429 Pfam Calcineurin-like phosphoesterase 149 340 IPR004843 GO:0016787
Aed2g1965 429 Gene3D - 53 144 - -
Aed2g1965 429 Gene3D - 145 417 IPR029052 -
Aed2g1965 429 PANTHER ACID PHOSPHATASE RELATED 5 420 IPR039331 GO:0003993
Aed2g1965 429 SUPERFAMILY Purple acid phosphatase, N-terminal domain 45 143 IPR008963 GO:0003993|GO:0046872
Aed2g1965 429 Pfam Purple acid Phosphatase, N-terminal domain 54 141 IPR015914 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1965 Aed-Chr2 24225630 24227438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1965 52 367 Miscellaneous Gene Families AT2G03450 26.596 6.05e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1965 K22390 - gmx:100819446 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1965 2 24225630 24227438 Aed2g1965 2 24225630 24227438 ECH