Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1955 ATGGCATCGGCACTGGCGGGGGATGACTTGGCCTTATCGACGAGCAGTCGCCGGAGCTGGACGACGGCGAGTTTCAGGGACGCGTGGACGGCGGGGCCGGACGTGTTCAACTTGAGTGGGCGCCACGCGCATGAGGACGACGAGGAGGAGCTCAAATGGGCCGCCATAGACCGCTTGCCAACTTTTGAACGCATGAGAAAGGGAGTGCTCAGGCACGTGCTCGACGATGGTCACGTGGTTCTCGACGAAGTCGATGTTTCCAGCCTTAGTTTGCACGACAAGAAGCTCTTAGTCGATAGCGTCCTCAAGATTGTCGAGGAAGATAATGAGAAATTCCTACGCAGACTTAGAGATAGAGTTGATAGAGTGGGGATTGAAATTCCGAAGATTGAAGTTCGGTGCCAGAATTTATCTGTGGATGGTGATGTGTATGTTGGGAGTAGAGCACTTCCTACCCTGCTTAATTCCACTCTCAATGCTTTTGAGAGTGTTCTGGGAATGTTTCGCCTTGCTCCATCCAAGAAGAGAGAGATTCAGATTCTTAAAGATGTTAGTGGAATCGTTAAACCGTCAAGGATGACTCTCCTTTTGGGTCCTCCAAGTTCTGGGAAAACAACATTGCTTTTGGCGCTTGCAGGGAAACTTGATCGTGATTTAAGGGTGTCTGGGAGAATCACTTACTGTGGCCATGAGCTAAATGAATTTGTTCCACAAAAAACCTGTGCTTATATTAGCCAACACGACATTCACTATGGAGAAATGACAGTGAGAGAGACATTAGATTTTTCAGGACGTTGTCTAGGTGTTGGTACTAGGTATGAAGCGTTGGTGGAACTCTCAAGAAGGGAGAGAGAAGCAGGAATAAAGCCAGACCCTGAGATTGATGCATTCATGAAGGCTATAGCATTGTCAGGTCAAAAAACCAATTTGATACTTGGATTGGATATTTGTGCCGACATTGTGGTTGGAGATGATATGAGAAGGGGCATCTCTGGTGGACAGAAGAAGCGAGTAACAACAGGGGAGATGCTGGTAGGACCAGCAAAGGCATTATTTATGGATGAAATATCAACAGGATTAGACAGTTCCACCACCTTTCAGATATGCAAGTTCATGAGGCAAATGGTTCATATAATGGATGTAACCATGGTGATTTCTCTTCTACAACCAGCACCAGAGACATTTGAACTCTTTGATGACATTATCCTACTTTCAGAAGGTCAAATTGTGTACCAAGGTCCACGTGAGAATGTACTAGAGTTCTTTGAACACATGGGTTTCAAGTGTCCTGAGAGAAAAGGAGTTGCTGATTTCTTACAAGAAGTAACATCCAAGAAAGACCAGCAACAATATTGGTCTAGAAAAGATGAACCTTACAGATATATTTCGGTTCCTGAATTTGTGGAAGCTTTTGGTTCATTTGACATAGGAGAGCAACTTGCCACTGAGCTTGGGGTTCCCTATGATAAGAGCCAAGTCCACCCAGCTGCATTAGTGAAAGACAAGTATGGTATAACAAACCGGGAACTATTTAAGGCGTGTTTTTCAAGAGAATGGCTACTTATGAAGCGAAGTTCTTTTGTTTACATATTCAAGACATCACAGATAACCATCATGTCTATTATTACATTTACTGTGTTCCTTAGAACAGAAATGTCAGTGGGAACTGTTCAAGATGGACAAAAATTCTTTGGAGCATTGTTCTTTACTCTAGTAAATGTAATGTTTAATGGGATGGCAGAACTGTCTATGACTGTTTTTAGGCTTCCTGTGTTTTACAAACAAAGGGATTTCAAGTTCTACCCTGCATGGGCATTTGGTTTGCCTATATGGCTTCTCAGGATCCCTCTCTCCATTGTGGAATCAGGGATATGGATTGTCCTTACATATTACACAATAGGGTTTGCTCCTTCTGCTAGCAGATTTTTCCGACAATTCTTGGCATTATTTGGCATTCATCAGATGGCTCTCTCTTTGTTTCGGTTCATTGCTGCAGCTGGGAGAACACTAGTTGTTGCTAATACACTGGGTACCTTGTCTCTGCAATTGATATTTGTGCTAGGAGGTTTTGTTATTGCCAAAGATGACATTAAGCCATGGATGATGTGGGGCTATTATCTATCTCCTATGATGTATGGTCAGAATGCCATAGTAATAAATGAATTCTTAGATAACCGATGGAGTAAACCAAATACAGACCCTAGAATTGATGCACCTACAGTTGGGAAGGTGCTTCTCAAATCTAGAGGCTTCTATACAGAAGAGTATTGGTTTTGGATCTGCATTGGAGCCTTGCTTGGGTTTTCTCTTCTCTTCAACCTCTTATTCATTTTTGCTTTAACTTATTTTAATCCTTTGGGTGATTCAAAAGCAGTCATTGCGGATGAAGGTGACAAAAAGAATGACAAGTCATCCCCTAGACAACATATCCTTGAAGGTGCAGACACGGCATTGAAAAGTTCTTCAGAAATTGCTAGTTCTTTGAACCAAGAACCAAGAAGAGGAATGGTCCTACCGTTTCAACCTCTTTCACTTGCATTCAATCATATTAGCTACTACGTAGATATGCCTGCAGAATTGAGGAGTCAAGGAATCCATAAAGATCGACTTCAACTACTACAAGGTGTTAGTGGTGCTTTTAGACCAGGAATATTGACAGCACTTGTGGGTGTTAGTGGTGCTGGGAAGACAACTCTTATGGATGCTATCCCAGGGGTTCCAAAAATCAAGGATGGTTATAATCCTGCCACATGGATGCTTGATATCAGCTCTACTTCAATGGAGGCTAATCTTGAGGTCGATTTTGCAGAGACTTATGCTAAGTCTACCCTTTACCGACTGATTTATCAAAAAGTTTATGACCTAAAAAAAAGTTAA 2877 0.4254 MASALAGDDLALSTSSRRSWTTASFRDAWTAGPDVFNLSGRHAHEDDEEELKWAAIDRLPTFERMRKGVLRHVLDDGHVVLDEVDVSSLSLHDKKLLVDSVLKIVEEDNEKFLRRLRDRVDRVGIEIPKIEVRCQNLSVDGDVYVGSRALPTLLNSTLNAFESVLGMFRLAPSKKREIQILKDVSGIVKPSRMTLLLGPPSSGKTTLLLALAGKLDRDLRVSGRITYCGHELNEFVPQKTCAYISQHDIHYGEMTVRETLDFSGRCLGVGTRYEALVELSRREREAGIKPDPEIDAFMKAIALSGQKTNLILGLDICADIVVGDDMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQICKFMRQMVHIMDVTMVISLLQPAPETFELFDDIILLSEGQIVYQGPRENVLEFFEHMGFKCPERKGVADFLQEVTSKKDQQQYWSRKDEPYRYISVPEFVEAFGSFDIGEQLATELGVPYDKSQVHPAALVKDKYGITNRELFKACFSREWLLMKRSSFVYIFKTSQITIMSIITFTVFLRTEMSVGTVQDGQKFFGALFFTLVNVMFNGMAELSMTVFRLPVFYKQRDFKFYPAWAFGLPIWLLRIPLSIVESGIWIVLTYYTIGFAPSASRFFRQFLALFGIHQMALSLFRFIAAAGRTLVVANTLGTLSLQLIFVLGGFVIAKDDIKPWMMWGYYLSPMMYGQNAIVINEFLDNRWSKPNTDPRIDAPTVGKVLLKSRGFYTEEYWFWICIGALLGFSLLFNLLFIFALTYFNPLGDSKAVIADEGDKKNDKSSPRQHILEGADTALKSSSEIASSLNQEPRRGMVLPFQPLSLAFNHISYYVDMPAELRSQGIHKDRLQLLQGVSGAFRPGILTALVGVSGAGKTTLMDAIPGVPKIKDGYNPATWMLDISSTSMEANLEVDFAETYAKSTLYRLIYQKVYDLKKS 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1955 958 Gene3D - 167 462 IPR027417 -
Aed2g1955 958 Pfam Plant PDR ABC transporter associated 727 793 IPR013581 -
Aed2g1955 958 SMART AAA_5 190 408 IPR003593 -
Aed2g1955 958 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 869 912 IPR027417 -
Aed2g1955 958 Pfam ABC-2 type transporter 389 458 IPR043926 GO:0140359
Aed2g1955 958 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 444 IPR027417 -
Aed2g1955 958 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 165 431 IPR003439 GO:0005524
Aed2g1955 958 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 901 947 - -
Aed2g1955 958 Pfam ABC transporter 181 356 IPR003439 GO:0005524
Aed2g1955 958 Pfam ABC-transporter N-terminal 106 155 IPR029481 -
Aed2g1955 958 Pfam ABC-2 type transporter 510 722 IPR013525 GO:0016020|GO:0140359
Aed2g1955 958 CDD ABCG_PDR_domain1 169 413 IPR034001 -
Aed2g1955 958 PANTHER ATP-BINDING CASSETTE TRANSPORTER 20 902 - -
Aed2g1955 958 PANTHER ATP-BINDING CASSETTE TRANSPORTER 901 947 - -
Aed2g1955 958 Gene3D - 821 945 IPR027417 -
Aed2g1955 958 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 20 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1955 Aed-Chr2 24142192 24150518 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1955 K08711 - gmx:100786482 1640.55