Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1953 ATGGTTTACACCATCTCGGGAATTCGATTTCCGGTTATTCCTTCGCTTCATAACTCGAGCTTCCGTGGCGATCGCGGAACTGCATCTCTTCCCGTTTTTCTCAGAAACAACTCCTTCTCTCGGAAAATCCTTGCAGTAAAATCTTCCCATGATTCTGATTCCCTGTCTTCTGCTATTGCTGAATCTGATAAAGTACTTATTCCTAAAGATCAAGATAACTCTACAACCTCGACAGATCAACTTGAAACTCCTGATATAACCTCGGAGGATCCACAGAACTTAGAGGATTTGACCATGGAAGATGAGGATAAATACAACATTAGTGAAGCAGCTAGCAGTTACAGACAGATTGAAGATGGACAAGGCTCTGTTGTATCATCACTTGTAGATGTGAACATTCCGGCCAAGAAGACATCAGTATCTGTTGGTAGGAAAGCAAATATAGTAAGTGATGAAGCTAAACCTAAGATCATTCCCCCACCTGGCGCTGGGCAGAAAATATACAAGATAGATTCATATTTGCTAGCTCACCGAGAGCATCTTGATTTCCGGTATGGACAATACAAAAGATTGCGATCTGAAATTGACAAGCATGAAGGTGGTCTGGATACATTTTCTCGTGCAGCATTAATTGGGGACTTCAACAATTGGAATCCAAATGCAGATGTAATGACCAGGAATGAGTTTGGTGTGTGGGAGATCTTCTTGCCAAACAACGTGGATGATTCACCACCAATTCCTCATGGTTCTCGGGTCAAGATCCGCATGGATACTCCCACTGGAATCAAGGACTCAATTCCTGCTTGGATTAAGTTTTCTGAAAAATATGTCTTCGAACATCCACAGCCAAAGAGACCAAAATCACTTAGAATATATGAGTCACACATCGGAATGAGTAGTCCGGAGCCAAAAATCAACACATATGCCAATTTTAGAGATGATGTACTTCCTCGCATTAAAAAGCTTGGCTATAATGCTGTCCAGATTATGGCTATCCAAGAACATTCTTATTATGCCAGCTTTGGATACCATGTTACAAATTTCTTTGCACCTAGCAGCCGATTTGGAACTCCAGAGGAACTTAACCATGCATCAAATAATACATTGGATGGGCTGAACATGTTTGATGGAACTGATAGTCATTACTTCCATCCTGGGTCACGAGGTTATCATTGGGTGTGGGATTCTCGCCTTTTTAACTATGGAAGCTGGGAAGTTCTAAGGTATCTACTTTCGAATTCAAGATGGTGGCTGGAGGAATACAAGTTTGATGGATTTCGATTTGATGGTGTTACATCAATGATGTACACTCATCATGGATTGCAGGTAGCATTTACTGGAAATTACAATGAGTATTTTGGTTTTGCAACTGATGTTGATGCTGTGGCTTACCTGATGCTGACTAATGATGTCATTCATGGGCTCTTCCCCGAGGCTGTTACAATTGGTGAAGATGTGAGTGGAATGCCAACATTCTGCCTTCCTACACAAGATGGTGGTGTTGGCTTTGATTATCGCCTGCACATGGCCATTGCAGACAAGTGGATTGAGATGCTCAAGAAGAAAGATGAAGACTGGAAAATGGGTGATATCATCCACACACTTACAAACAGAAGGTGGCTGGAAAAATGTGTAGCTTATGCTGAAAGTCATGACCAGGCCTTGGTTGGTGACAAGACAATTGCATTTTGGTTGATGGACAAGGATATGTATGACTTCATGGCTTTAGACAGACCATCTACACCTCTTGTAGATCGTGGTATAGCATTACACAAAATGATTAGGCTTATTACCATGGGCCTTGGTGGTGAAGGGTATTTGAATTTTATGGGGAATGAATTCGGCCATCCTGAGTGGATTGATTTTCCGAGGGGTGATCAACATCTTCCTACTGGCGTAGTAGTTCCAGGGAATAACAACAGTTTTGATAAATGCAGGCGTAGATTTGACTTGGGGGATGCGGACTATCTAAGATATCGAGGGATGCAAGAATTTGATCAAGCCATGCAGCATCTAGAAGAAACGTTTGGTTTCATGACTGCTGAGCACCAGTATATTTCACGGAAACATGAAGGTGACAAAGTTATAGTGTTCGAAAGGGGCAACCTCGTCTTTGTCTTCAATTTCCATTGGACCAACAGCTATTCAGATTACAGAGTTGGCTGCTCATCCCCTGGGAAATATAAGATTGTCTTGGATTCAGATGATGCCTTGTTTGGTGGCTTCAGTAGGCTCAATCCCGCTGCTGAGTATTTCACCTCTGATGGATGGTATGATGACCGACCTCGATCATTTCTTATCTATGCACCTTCTAGAACAGCAGTGGTTTATGCCCTTGCAGAAAATGAAGTTGAACCTGCCCTAGCAGATGAAGCTGAACCAGAGCCAGTTGATCCTTGA 2400 0.4238 MVYTISGIRFPVIPSLHNSSFRGDRGTASLPVFLRNNSFSRKILAVKSSHDSDSLSSAIAESDKVLIPKDQDNSTTSTDQLETPDITSEDPQNLEDLTMEDEDKYNISEAASSYRQIEDGQGSVVSSLVDVNIPAKKTSVSVGRKANIVSDEAKPKIIPPPGAGQKIYKIDSYLLAHREHLDFRYGQYKRLRSEIDKHEGGLDTFSRAALIGDFNNWNPNADVMTRNEFGVWEIFLPNNVDDSPPIPHGSRVKIRMDTPTGIKDSIPAWIKFSEKYVFEHPQPKRPKSLRIYESHIGMSSPEPKINTYANFRDDVLPRIKKLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPEELNHASNNTLDGLNMFDGTDSHYFHPGSRGYHWVWDSRLFNYGSWEVLRYLLSNSRWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYNEYFGFATDVDAVAYLMLTNDVIHGLFPEAVTIGEDVSGMPTFCLPTQDGGVGFDYRLHMAIADKWIEMLKKKDEDWKMGDIIHTLTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPLVDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQHLPTGVVVPGNNNSFDKCRRRFDLGDADYLRYRGMQEFDQAMQHLEETFGFMTAEHQYISRKHEGDKVIVFERGNLVFVFNFHWTNSYSDYRVGCSSPGKYKIVLDSDDALFGGFSRLNPAAEYFTSDGWYDDRPRSFLIYAPSRTAVVYALAENEVEPALADEAEPEPVDP 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1953 799 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 2-1, CHLOROPLASTIC/AMYLOPLASTIC 11 208 - -
Aed2g1953 799 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 207 269 IPR004193 GO:0004553|GO:0005975
Aed2g1953 799 CDD AmyAc_bac_euk_BE 273 667 - -
Aed2g1953 799 SUPERFAMILY Glycosyl hydrolase domain 682 779 - -
Aed2g1953 799 Gene3D - 681 787 IPR013780 -
Aed2g1953 799 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 208 787 IPR037439 GO:0003844|GO:0005978
Aed2g1953 799 SUPERFAMILY (Trans)glycosidases 280 673 IPR017853 -
Aed2g1953 799 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 2-1, CHLOROPLASTIC/AMYLOPLASTIC 208 787 - -
Aed2g1953 799 SUPERFAMILY E set domains 206 274 IPR014756 -
Aed2g1953 799 SMART aamy 306 646 IPR006047 GO:0005975
Aed2g1953 799 Pfam Alpha amylase, C-terminal all-beta domain 685 778 IPR006048 GO:0003824|GO:0005975|GO:0043169
Aed2g1953 799 MobiDBLite consensus disorder prediction 66 92 - -
Aed2g1953 799 MobiDBLite consensus disorder prediction 69 92 - -
Aed2g1953 799 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 11 208 IPR037439 GO:0003844|GO:0005978
Aed2g1953 799 Gene3D Glycosidases 276 676 - -
Aed2g1953 799 Gene3D Immunoglobulins 207 275 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1953 Aed-Chr2 24108642 24128413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1953 9 783 Glycoside Hydrolase AT5G03650 67.976 0.0 1150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1953 K00700 - gmx:100816963 1501.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1953 2 24108642 24128413 Aed2g1953 2 24108642 24128413 ECH