Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1945 ATGTTGGAAATTCATCACCTACACTTTCTAGCGATTCTCTTTCTATATACTACTTTGACATGCTCTGAAACCGCACCCACTCCCATCCCACTAGAGCTTCCCATAGGCTTCTCGGCGGTGCCAGAGTCTTCTTCAACGATGCCGTTTCAGGCAGTTCTGAGCGACCCTAGCGGGAACTTCTCTCTAGGCTTCCTTCGCGTGAACAAAAACCAGCTGTCGCTGGCGATCCTCCACGTGGCATCCTCAGAGCCCTTCTGGGTGGCCAACCCAACCAACGCCGCATCCTGGTTCCACACCACGCGCCTCTTCTTCAACGGCAGTCTCGTCCTGTCCGACCCCGAAACGCGCGTTTCGTGGTCAACCGCCACAAACGGAGGAGACCGCGCGGTGCTACTCAACACCTCCAATTTACAGATTGTTGTTGACCACAAAGCTGCTCCCTTATGGGAGAGTTTTCAGTTTCCCAGAAATACCCTCGTCCAGGACCAGAATTTCACCTCCAACATGACTTTGTCATCCTCCAACGGCATTTATTCCATGAGGTTAGGCAATGATTTCATGGGATTATACGACGAAGACGTAATATTATATTGGAAACGCTCACCACTGGAATCAAAAGCTGAAGTGAATGAAGGGCAGGGACCGATTTACGCCCGAGTCAACCCGGAGGGTGGTTACCTCGGGATGTATCAGACAAGCGACACCAAGCCCGCGGATGTTCAAAAGTTCAACACCTTCCAACTAACGTCGTCATTTCTCATCCTGCGCTTGGAACCGGACGGGAATCTCAAGGGCTATTACTGGGACGGTTCCAACTGGCTTCTTAACTACCAGGCTATCTCTGAAGCCTGCGACCTCCCCCGCTCCTGCGGTTCCTACGGTCTCTGCACGCCGGGCGGCTCCGGTTGCTCCTGTTTGGATAACCAGACCCGGTTCGAACCGGGTGGTTGTTTAAATATTGGAGATGATCATGGAGACCTGTGTAGTGGTAGTAGTAGTAGTAGTAGTAGTGAAGGGATTGGTAGTGGAAGTAATAACAGTTACAGGGTGCTGAGAAGAAGCGGCGTGGAGCCGCAGCATAAGGAGCTGCTACGTCACGTGACGACGTCGTCTCTGGCGGAGTGCGAGAAATTCTGCCAGAACAACTGTAGCTGTTGGGGGGCGCTCTATAGCAACGATACTGGGTTTTGTTATGTGTTGGACTATCCCATCCAGACCATGCTGGGTACCGGGGACGGGTCCAAAGTGGGTTATTTCAAGGTTAGAAAAGAGGAACGGGGGAAGAATCGGGTTTGGTTGCGAGTTGGGATTGTGGTTACGGTTTTAGTTATGGTTGGGGTTGTTATTACAGGGACCGGGTTTTGCGTGACGAGATGGAGAAAGAGGAGAGGGGTGAAGGAAGAGGATTGGGCCTCACCCGGCCCGTATAAGAATCTTGAATCCGCTAGTTTCAGATCAATTGAAATGAGCAACGCCGCCCAGTGA 1485 0.5192 MLEIHHLHFLAILFLYTTLTCSETAPTPIPLELPIGFSAVPESSSTMPFQAVLSDPSGNFSLGFLRVNKNQLSLAILHVASSEPFWVANPTNAASWFHTTRLFFNGSLVLSDPETRVSWSTATNGGDRAVLLNTSNLQIVVDHKAAPLWESFQFPRNTLVQDQNFTSNMTLSSSNGIYSMRLGNDFMGLYDEDVILYWKRSPLESKAEVNEGQGPIYARVNPEGGYLGMYQTSDTKPADVQKFNTFQLTSSFLILRLEPDGNLKGYYWDGSNWLLNYQAISEACDLPRSCGSYGLCTPGGSGCSCLDNQTRFEPGGCLNIGDDHGDLCSGSSSSSSSEGIGSGSNNSYRVLRRSGVEPQHKELLRHVTTSSLAECEKFCQNNCSCWGALYSNDTGFCYVLDYPIQTMLGTGDGSKVGYFKVRKEERGKNRVWLRVGIVVTVLVMVGVVITGTGFCVTRWRKRRGVKEEDWASPGPYKNLESASFRSIEMSNAAQ 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1945 494 Pfam PAN domain 366 401 IPR003609 -
Aed2g1945 494 PANTHER OS11G0149900 PROTEIN 39 482 - -
Aed2g1945 494 ProSiteProfiles PAN/Apple domain profile. 328 423 IPR003609 -
Aed2g1945 494 SMART blect_4 44 155 IPR001480 -
Aed2g1945 494 ProSiteProfiles Bulb-type lectin domain profile. 38 153 IPR001480 -
Aed2g1945 494 Pfam S-locus glycoprotein domain 245 307 IPR000858 GO:0048544
Aed2g1945 494 Pfam D-mannose binding lectin 85 179 IPR001480 -
Aed2g1945 494 Gene3D - 42 154 IPR036426 -
Aed2g1945 494 PIRSF SLG 1 434 IPR035446 -
Aed2g1945 494 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 199 IPR036426 -
Aed2g1945 494 PANTHER - 39 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1945 Aed-Chr2 24019694 24021178 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1945 - - gmx:100812159 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1945 2 24019694 24021178 Aed2g1945 2 24019694 24021178 ECH