Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1920 ATGGACGCACCTCGTAAACAGCAGGTGTCGCTGAGAGGAGCAAGTGCGAAGGAGATTACGAGAGACGCGCTTCTTCAGAAGATCTCTCGCGAAAGAGAACTTCGCAATTACGCTAAAAGAGCTGCTGCTGCTGCTCTCTTCATTCAGAGAGTATGGAGGCGCTTCAAGGTCACAAAGATGATTTCGCTGCAGCTTCAGCAGGAGTGGGAGATAGTGGTGAATCATTATACTGGTGTGGTGACAGCAAATTGGATTTCAAACAATTTGTTGAGACCATTTCTGTTCTTTATCACCCGTATCTCAACGCAGCATCAGAAGGTCCACAGCAAGAGAATAGATTCTATAAAGCGGTGCTTTACAATCCTACTGGAAAGCCTGAAATCTTCTGATTCAAAGCAGAACTTCTGCTTTCTGGCAATTGGCACAACTGAAGCAAGAAAAATATGGAGATACCAAGCACGACAGCTGACTTCTCTTAGTTTTTTCATCCTTTCAGAGTTTAGTGAATGTAATTCAGGGGCTCAAGATATTACTATTGTTGCATCTCTAGCTATGCGTGTTCTTGTAATGTTAACTGATCTGAAAGGATGGAAAGTCATTACAGATGACAACCACTTAGATGCAGATTTAGCAGTGAAAGATTTAATTCAGTTCATGGGGGGTAATAAAAGTGGTTGTTATGTGTCCATTGGCAGATATATTAGTACATTAGAAAATCGTTCCTCTAAGTCAAAGAGTATCACCCAGGCTGATGATTTTTTTTTCATTACTGCAAGTGCTATAACTTTAGCTGTGCGGCCATTTTATCTGACAAACTATGATGTAGAAGTGCCTGGCACGCTGGATGTCAACCATGCTGCTAAGCAGTATATTGTTTATCTTTTGACTATACCTTGGCTAGTGCAACATCTCCCACCTGTTCTTCTGCCTGCGTTAAAGCACAAATCTATTTTGTTTCCATGCTTCCAGACTCTATTGATTTTGAGAGAGAAAGTTTTGACGGAGATGTCAGAGTTCGTCAAATCAGAGATACTTGTCACTTTCAAGGTTATTCCACCAGTTGGTTGGGCCCTTGCTAACAGTATATGCCTAGCAACCGGGAATGAGAATGAATCCTTCAATCAAGGTTTAGACTATGCATTGTATGTCCGTGTTGTTATTACTCTAGCAGAGGCCCTACTGGCTTGTCTTGATAATATTGGATGGGTGAAAAACAAAAAGAAAGCCCTTCAAACTGATGTTGAAAGTTCAACACAGCCAGTTGATACAGTTCAGCATGATGGTGAAGCAACCAATGAATCCTTAATAATGTCATACATGGATCAATTTAGGCCTGTTTGTCAGCAGTGGCATCTCAAAAATCTTTTGGCATCAATAGATAGAGATGCAACTAACAAGGCTGAGACTGTGCTCTCAAATGGCCTGGCATGTCTGGGGAAGCTAGAATTGTGTGATGTTGCACTTTTTTATTCTAACTTACTTAGAATATTTTCAGTTTTGAGTCCAATTCGTGGCTCATTATCAGTTCTCAACATGCTATCATTCACTCCTGGATTTCTTGTGAGATTGTGGTGTGTACTGGAGGATTCCTTTTTTTCTGGAGACAAACATAATTCTGATAATCACAAAATTGAAATCAGCAAACATAAAGCCTTTGAGAAGATGCAAAAACATGTCAGTAAAGATGGGGCTAATAAGTGGGTCAACGTGCTTCATAAATTTACAGGCAAGTCACAAGCAGGAACAGAATGCACATATTTCATTGGCAGTCACTCTGAGCCTAGTAGAGCGAATGATGATTCATCAGATATATGGGACATAGAACTTATGAGGTATGGCCCACAAGGCATTCCAAAGGATATGTTTTCCATGCTTCATCTTTTCTGTGCAACCTATTCTCACCTGCTTTTAGTTCTTGATGACATAGAGTTCTATGAGAAACAGGTTCCATTCAAAATAGAGCAGCAAAGAAGAATTGCGTCAATGCTTAATACCCTGGTTTACAATGGATTGTCCCATGTAAGTGGTCATCATAACAGACCTCTCATGGATTGTGCTGTCAGATGCTTACATTTACTGTATGAAAGGGATTGCAGACACCCATTTTGTCCTCCTGCTTTGTGGCTTTCTCCTGCTAGAAAAAGCCGGCCACCAATTGCAGTTGCTGCCAGAACTCATGAAGTTTTAGCAGCCAACCTGAGATCTGATGATTCATCAGCTTCATTGAGTGTTGGTTCCATTGTCACCATTGTTCCTCATGTTTTCCCTTTTGAGGAGAGTCTACTATTGATTATAGAAAGTACTCAATCAGTTGTTTTATCCCTGAATAGAGTTGAGATGTTTCGTGAATTTATCAAGATGGATAAAGCATCCCGAAAAATGGCTGGTGAAATTTCTGAACCTGGTTCACGAGCCATTGAGATAGTAGTACGTCGGGGTCATATTGTTGAAGATGGATTTCGGCAATTAAATTCCCTTGGGTCAAGGTTGAAGTCGGATATCCATGTATCATTTGTCAGTGAATGTGGTCTTCTTGAGGCTGGTCTGGACTATGGTGGATTATCTAAAGAGTTTCTTACTGACATATCAAAAGCAGCATTTGCTCCCGAGTATGGACTCTTTTCACAAACCTCAACTTCAGACATGCTTCTAATTCCAACTGCATCTGCCAAATATTTGGAGAATGGTCTTCAGATGATTGAATTCCTTGGAAGAGTAGTGGGTAAAGCTCTATATGAAGGAATATTACTGGATTACTCTTTCTCCCATGTTTTTGTACAAAAGCTGCTGGGACGATATAGCTTTCTTGATGAATTATCAACACTTGATCCAGAGCTATACAGGAATCTTATGTATGTCAAGAATTATGACGGTGATATCAAGGAGCTCTCTCTTGATTTCACAGTTACTGAAGAATCATTAGGCAAAAGGTATGTGGTGGAACTTAAGTCTGGTGGCAAAGATATTTCTGTGACAAATGAGAACAAGATGCAGTACATACATGCAATGGCAGACTACAAACTCAACCACCAGATATTGCCCTTTTCAAATGCGCTTTATAGAGGGTTAACTGATCTTATATCTCCATCCTGGTTGAAGTTATTCAATGCTGGTGAATTTAATCAGTTGCTTTCAGGTGGCAATTATGATATTGATGCTGATGATTTGAAAAATAACACACGATACACTGGTGGTTACAACGAAGGAAGCCGGACAATCAAGATTTTTTGGGAGGTAATTAAAGGCTTTGAACCTAAAGAACGTTGTATGCTTCTTAAATTTGTCACCAGTTGTTCTCGTGCTCCATTACTTGGGTTCAAATACTTGCATCCACCTTTTACCATCCACAAGGTTGCATGTGATGTTCCTCTTTGGGCAACAATAGGAGGACAAGATGTAGATCGGCTTCCATCAGCTTCAACCTGCTACAATACTCTTAAGGCACATGCCATTGTTAGTGGGCCTGGTGCTCAATATGCCAAAGAGGCTAGTATATATCAAATACCAAAAGTTTAG 3516 0.4027 MDAPRKQQVSLRGASAKEITRDALLQKISRERELRNYAKRAAAAALFIQRVWRRFKVTKMISLQLQQEWEIVVNHYTGVVTANWISNNLLRPFLFFITRISTQHQKVHSKRIDSIKRCFTILLESLKSSDSKQNFCFLAIGTTEARKIWRYQARQLTSLSFFILSEFSECNSGAQDITIVASLAMRVLVMLTDLKGWKVITDDNHLDADLAVKDLIQFMGGNKSGCYVSIGRYISTLENRSSKSKSITQADDFFFITASAITLAVRPFYLTNYDVEVPGTLDVNHAAKQYIVYLLTIPWLVQHLPPVLLPALKHKSILFPCFQTLLILREKVLTEMSEFVKSEILVTFKVIPPVGWALANSICLATGNENESFNQGLDYALYVRVVITLAEALLACLDNIGWVKNKKKALQTDVESSTQPVDTVQHDGEATNESLIMSYMDQFRPVCQQWHLKNLLASIDRDATNKAETVLSNGLACLGKLELCDVALFYSNLLRIFSVLSPIRGSLSVLNMLSFTPGFLVRLWCVLEDSFFSGDKHNSDNHKIEISKHKAFEKMQKHVSKDGANKWVNVLHKFTGKSQAGTECTYFIGSHSEPSRANDDSSDIWDIELMRYGPQGIPKDMFSMLHLFCATYSHLLLVLDDIEFYEKQVPFKIEQQRRIASMLNTLVYNGLSHVSGHHNRPLMDCAVRCLHLLYERDCRHPFCPPALWLSPARKSRPPIAVAARTHEVLAANLRSDDSSASLSVGSIVTIVPHVFPFEESLLLIIESTQSVVLSLNRVEMFREFIKMDKASRKMAGEISEPGSRAIEIVVRRGHIVEDGFRQLNSLGSRLKSDIHVSFVSECGLLEAGLDYGGLSKEFLTDISKAAFAPEYGLFSQTSTSDMLLIPTASAKYLENGLQMIEFLGRVVGKALYEGILLDYSFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKNYDGDIKELSLDFTVTEESLGKRYVVELKSGGKDISVTNENKMQYIHAMADYKLNHQILPFSNALYRGLTDLISPSWLKLFNAGEFNQLLSGGNYDIDADDLKNNTRYTGGYNEGSRTIKIFWEVIKGFEPKERCMLLKFVTSCSRAPLLGFKYLHPPFTIHKVACDVPLWATIGGQDVDRLPSASTCYNTLKAHAIVSGPGAQYAKEASIYQIPKV 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1920 1171 CDD HECTc 806 1147 IPR000569 GO:0004842
Aed2g1920 1171 SUPERFAMILY Hect, E3 ligase catalytic domain 806 1147 IPR035983 GO:0004842
Aed2g1920 1171 Gene3D Hect, E3 ligase catalytic domain 1049 1153 - -
Aed2g1920 1171 ProSiteProfiles HECT domain profile. 830 1147 IPR000569 GO:0004842
Aed2g1920 1171 Gene3D Hect, E3 ligase catalytic domain 932 1011 - -
Aed2g1920 1171 SMART hect_3 824 1160 IPR000569 GO:0004842
Aed2g1920 1171 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 3 1147 - -
Aed2g1920 1171 Gene3D Hect, E3 ligase catalytic domains 808 1046 - -
Aed2g1920 1171 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 3 1147 IPR044611 GO:0000209|GO:0061630
Aed2g1920 1171 Pfam HECT-domain (ubiquitin-transferase) 861 1148 IPR000569 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1920 Aed-Chr2 23789775 23802626 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1920 K10588 - gmx:100527169 2079.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1920 2 23789775 23802626 Aed2g1920 2 23789775 23802626 ECH