Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1893 ATGGCGGCAACCTCAACATCACTGGCTTCTCAACTCTACATTGGCCTGCGCCGCCCATGCCCTAAGCTTGATTCTTTCAATTCGCAATCTTTCTCTGTCTTTGACCCCAATCTTCGCCTATCACTCTCTCCTCCCAAACCCTCACGCGCCGTCGTCGCCATGGCCGGCACCGGCAAGTTCTTTGTTGGTGGCAACTGGAAGTGTAATGGAACAAAAGACTCCATCAGTAAGCTTGTCGCTGACTTGAACAGTGCAAAATTGGAGCCTGATGTTGATGTTGTTGTCGCACCTCCCTTTCTATACATCAATCAAGTGAAAAACTCACTCACTGAGCGGATTGAAATATCTGCCCAAAATTCTTGGGTGGGAAAAGGTGGTGCTTTCACTGGAGAAATCAGCGCGGAACAATTGAAAGATCTTGGATGCAAGTGGGTTGTTCTTGGACATTCTGAGCGAAGACATGTTATTGGAGAAAATGATGAGAGGATTATAGCTTACACAAAGAAAAAATGTATTCTTACAATCAATGAACTCCGTGCCATTCATTTGATAGCTGTTATGCTAGATAGGAGGTCTGTAAATGGAGGAAACAGTGCTGAGCTAGCAAAGCAAGAAGATATTGACGGATTTCTGGTTGGAGGTGCTTCATTAAAGGGTCCTGAGTTTGCTACCATTGTCAATTCAGTCACATCCAAGAAAGTTGCGGCTTGA 711 0.4515 MAATSTSLASQLYIGLRRPCPKLDSFNSQSFSVFDPNLRLSLSPPKPSRAVVAMAGTGKFFVGGNWKCNGTKDSISKLVADLNSAKLEPDVDVVVAPPFLYINQVKNSLTERIEISAQNSWVGKGGAFTGEISAEQLKDLGCKWVVLGHSERRHVIGENDERIIAYTKKKCILTINELRAIHLIAVMLDRRSVNGGNSAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSKKVAA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1893 236 PANTHER TRIOSEPHOSPHATE ISOMERASE, CHLOROPLASTIC 1 188 - -
Aed2g1893 236 CDD TIM 60 227 IPR000652 GO:0004807
Aed2g1893 236 PANTHER TRIOSEPHOSPHATE ISOMERASE, CHLOROPLASTIC 191 234 - -
Aed2g1893 236 Gene3D Aldolase class I 45 184 IPR013785 -
Aed2g1893 236 Gene3D Aldolase class I 185 236 IPR013785 -
Aed2g1893 236 ProSiteProfiles Triosephosphate isomerase (TIM) family profile. 59 236 IPR000652 GO:0004807
Aed2g1893 236 PANTHER TRIOSEPHOSPHATE ISOMERASE 191 234 IPR000652 GO:0004807
Aed2g1893 236 Pfam Triosephosphate isomerase 61 168 IPR000652 GO:0004807
Aed2g1893 236 Pfam Triosephosphate isomerase 192 228 IPR000652 GO:0004807
Aed2g1893 236 PANTHER TRIOSEPHOSPHATE ISOMERASE 1 188 IPR000652 GO:0004807
Aed2g1893 236 SUPERFAMILY Triosephosphate isomerase (TIM) 55 229 IPR035990 GO:0004807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1893 Aed-Chr2 23557660 23561770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1893 K01803 - gmx:100819824 320.087