Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1870 ATGGGAGAGAAAAAAGAACAGGCGAAGAATGAGTCCGATAAGAAGCCCGACTCGGGAGCAAAGCAAAACGACGGTCCCGTCCCTGTCGTTTTGAAACTCGACATGCATTGCGAGGGATGTGTGAAGAAGATCAAACGCGCCGTTCGCAATTTCGACGGTGTGGAAGACGTCAAGGCCGATCTACCAGGTAACAAACTAACGGTTACTGGAAAAGTCGACCCTACCAAAGTGCGAGATAAACTAGCGGATAAAACTAAGAAGAAGGTTGAACTCGTTTCTCCTCAGCCCAAGAAAGATTCCGCCGGCGATAAACCACCAGAGAAGAAGCCGGAAGAGAAAAAATCCGAAGAGAAGAAGCCCGAAGAAAAAACACCGAAAGAGAGCACGGTGGTGTTGAAGGTCAGATTGCACTGTGACGGTTGCATTCAGAAAATTCGAAAGATTATTCTCCGAACCAAAGGAGTTGAATCGGTGAACGTTGAGGGAGGGGGGAAGGATTTGGTTACAGTGAAGGGGACGATGGACTTGAAGGAAATGGTACCGTATTTGAACGAGAAGTTAAAGCGGAACGTTGAAGTGGTTCCACCCAAGAAAGAAGGTGGTGGTGATAAGAAAGAGAACAAGGAAGGTGGTGGTGGTGATAAGAAAAAAGAGGGTGGTGAAGGTGCAGCGAAGGTTGAGGTTAACAAAATGGAGCACTACGGGTACGCGTACCCACCTCCCCCTATGTATTGGTACGGTGGTGGATACGCACCTGGTGAAAGTAGTAGTAGCAGCAGTAACTACGCGGTAGAGGTTCAACAACCAGGGTATGATGGTAATTACGGGAATTACCCTTACCAGACACATGGATATGTGAACCAAGGGTATAACAATAATTACATGGCACAACCACCGGTACAAACCCCGTTCTACTTGAATCCTCACCATCCTCCTCCACAGATGTTCAGCGATGAGAATCCCAATGCGTGTTCCGTGATGTGA 984 0.4776 MGEKKEQAKNESDKKPDSGAKQNDGPVPVVLKLDMHCEGCVKKIKRAVRNFDGVEDVKADLPGNKLTVTGKVDPTKVRDKLADKTKKKVELVSPQPKKDSAGDKPPEKKPEEKKSEEKKPEEKTPKESTVVLKVRLHCDGCIQKIRKIILRTKGVESVNVEGGGKDLVTVKGTMDLKEMVPYLNEKLKRNVEVVPPKKEGGGDKKENKEGGGGDKKKEGGEGAAKVEVNKMEHYGYAYPPPPMYWYGGGYAPGESSSSSSNYAVEVQQPGYDGNYGNYPYQTHGYVNQGYNNNYMAQPPVQTPFYLNPHHPPPQMFSDENPNACSVM 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1870 327 CDD HMA 131 192 IPR006121 GO:0046872
Aed2g1870 327 MobiDBLite consensus disorder prediction 1 20 - -
Aed2g1870 327 MobiDBLite consensus disorder prediction 192 222 - -
Aed2g1870 327 SUPERFAMILY HMA, heavy metal-associated domain 30 84 IPR036163 GO:0046872
Aed2g1870 327 MobiDBLite consensus disorder prediction 81 127 - -
Aed2g1870 327 Gene3D - 126 199 - -
Aed2g1870 327 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 1 327 IPR044594 GO:0046872
Aed2g1870 327 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 327 - -
Aed2g1870 327 Gene3D - 24 90 - -
Aed2g1870 327 ProSiteProfiles Heavy-metal-associated domain profile. 35 83 IPR006121 GO:0046872
Aed2g1870 327 MobiDBLite consensus disorder prediction 100 127 - -
Aed2g1870 327 CDD HMA 35 90 IPR006121 GO:0046872
Aed2g1870 327 SUPERFAMILY HMA, heavy metal-associated domain 128 189 IPR036163 GO:0046872
Aed2g1870 327 MobiDBLite consensus disorder prediction 1 27 - -
Aed2g1870 327 Pfam Heavy-metal-associated domain 33 87 IPR006121 GO:0046872
Aed2g1870 327 Pfam Heavy-metal-associated domain 132 192 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1870 Aed-Chr2 23386697 23389326 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1870 - - gmx:100792662 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1870 2 23386697 23389326 Aed2g1870 2 23386697 23389326 ECH