Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1843 ATGATGAACACAGCGAACGGCACCATGATGTCACCGACGACTTCATCGGGACCGGCACAGTCGCCGGGACTGAAGACCTATTTCAAAACCCCCGAGGGAAGATATAAGCTTCAATACGAGAAGACTCACCCTTCCGGTCTTCTTCATTACGCCCATGGCAAAACCGTTACTCAGGTAACCCTGGCACATCTCAAGGACAAGCCTGCGCCTTCTACCCCAACTGCGTCGTCGTCAAGTTTCAGTGCCAGCAGTGGGGTACGGTCGGCAGCAGCTAGATTGCTCGGAGGAAGCAATGGAAGCCGGGCACTTAGTTTTGTTGGAGGCAATGGTGGCAGCAAGAGTAATGGAGGGAATACTAGGATTGGTTCCATTGGTGCTTCGAGTGCAAGTAGTGCAATGGCGAATCCGAATTTTGACGGGAAAGGAACGTACTTGATATTCAATGTCGGGGATGCAATTTTCATCAGTGATTTGAATTCACAAGACAAGGACCCCATAAAGTCTATTCACTTCAGTTACTCAAATCCTGTGTGCCATGCGTTTGATCAGGATGCTAAGGATGGGCATGATTTGCTCATAGGTTTGAACTCTGGCGATGTCGTTGTACTTGTGTTGCTTGGGTGCCTGGAGGTGATGAACAAAGATGGTGCTGGTGATTCTTCTTTCCCAGTTGTAAAGGATCAAACTCAATTTTCGGTTGCCCATGCACGTTACAGTAAGAGTAATCCTATAGCCAGATGGCATATATGCCAGGGTTCAATTAATAGTATTTCTTTCTCAATGGATGGGGCATACTTAGCAACTGTTGGACGAGACGGTTATTTGCGAGTGTTTGATTACTCAAAAGAACAACTTATATGTGGTGGGAAAAGTTATTATGGTGCTTTGTTATGTTGTGCTTGGAGTGGAGTTGCTTTCGATTCATATTGGTCATCACCAAATTCAAATGACAATGGAGAGACTATTATGTATCGTTTTGGTTCTGTTGGTCAGGAGTCTGTGCTCACTGCCTGTCGGGAGGGGCATATTAAAGTCTGGATGAGGCCAGGGGTTGCAGAGAGCCAATCAAGCAACTCTGAAAACTTGTTAGCTACCAGTCTGAAGGAGAAGCCTTTACTTTCAAGCAAGATCAGCAGCAATTCTAGCTACAAGCAATGA 1158 0.4611 MMNTANGTMMSPTTSSGPAQSPGLKTYFKTPEGRYKLQYEKTHPSGLLHYAHGKTVTQVTLAHLKDKPAPSTPTASSSSFSASSGVRSAAARLLGGSNGSRALSFVGGNGGSKSNGGNTRIGSIGASSASSAMANPNFDGKGTYLIFNVGDAIFISDLNSQDKDPIKSIHFSYSNPVCHAFDQDAKDGHDLLIGLNSGDVVVLVLLGCLEVMNKDGAGDSSFPVVKDQTQFSVAHARYSKSNPIARWHICQGSINSISFSMDGAYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSGVAFDSYWSSPNSNDNGETIMYRFGSVGQESVLTACREGHIKVWMRPGVAESQSSNSENLLATSLKEKPLLSSKISSNSSYKQ 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1843 385 SMART WD40_4 282 347 IPR001680 GO:0005515
Aed2g1843 385 SMART WD40_4 240 279 IPR001680 GO:0005515
Aed2g1843 385 Gene3D - 14 308 IPR015943 GO:0005515
Aed2g1843 385 PANTHER LOW QUALITY PROTEIN: WD REPEAT-CONTAINING PROTEIN 20-LIKE 331 381 - -
Aed2g1843 385 PANTHER WD REPEAT PROTEIN 302 333 - -
Aed2g1843 385 PANTHER WD REPEAT PROTEIN 3 204 - -
Aed2g1843 385 PANTHER WD REPEAT PROTEIN 213 302 - -
Aed2g1843 385 PANTHER LOW QUALITY PROTEIN: WD REPEAT-CONTAINING PROTEIN 20-LIKE 302 333 - -
Aed2g1843 385 PANTHER LOW QUALITY PROTEIN: WD REPEAT-CONTAINING PROTEIN 20-LIKE 213 302 - -
Aed2g1843 385 MobiDBLite consensus disorder prediction 1 27 - -
Aed2g1843 385 PANTHER LOW QUALITY PROTEIN: WD REPEAT-CONTAINING PROTEIN 20-LIKE 3 204 - -
Aed2g1843 385 PANTHER WD REPEAT PROTEIN 331 381 - -
Aed2g1843 385 SUPERFAMILY WD40 repeat-like 138 346 IPR036322 GO:0005515
Aed2g1843 385 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1843 Aed-Chr2 23148800 23154094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1843 K24741 - gmx:100805756 534.258