Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1824 ATGGGTTCACTAGAGAGATCAAAGAAGAAAGTTCTTCTATGGAAGAAGGCCATGCTCCATTTTTCTCTATGTTTTGTGATGGGTTTTTTCACAGGCTTAGCTCCAACAGGTAAATCTTCTCTCTTTTCCACCAAAGTTGCTGTCTCAAATAGGACAGAATCTGAACCACAACCTAGTCAAATGTCACACCTCTCAACAAATGTCAATAGAAGTTGGATAACTCCAACGCCAGATACCATGCCCGTGAAGCCTAGAATCCTTGAAAATGAAAAGAAAACAACAACTACAACAACAACAACAAAGTTGCATGTAGAGGAACAAGAACAGACCCAGTTGAAGCCTAGAAGGCTCATAATCATTGTGACTCCAACAAGCACAAAACTACCCCACCAAGCTGTGTTTTTGAGAAGGTTGGCAAATACTATAAAGCTGGTTCCTCAACCGTTGCTGTGGATTGTTGTGGAAGCTAAAACCAATTCCACAGAACTGCCAGAGATACTAAGAAAAAGTGGCATCATGGTGTTTGGAACATGGCCAACAGCATTGTTAGCTGCACACAGGAAGAAAGTGAAAATCGAAGGACCTGTATGCGATTCATCACAAGTCATTGGTTGGCATCTAAGGAATATGAATAATGAAACTGATACAATCACTCCCCCCATTCATATTTCAAGTTTTGCATTTAATAGCTCCATCCTTTGGGACCCTGAGAGATGGGGTCGCACTTCCTCTGTTCAAGACACTTCTCAGAATTCAATCAAGTTCGTGAAGCAAGTAGTTCTAGAAGATGAGGCTAAAATAAAGGGAATTCCACCAGAGGATTGCTCCAAAATCTTGCTATGGCGTTTCAATTTTCGTGCTCGAACCACCTCAAGTCACTGA 882 0.415 MGSLERSKKKVLLWKKAMLHFSLCFVMGFFTGLAPTGKSSLFSTKVAVSNRTESEPQPSQMSHLSTNVNRSWITPTPDTMPVKPRILENEKKTTTTTTTTKLHVEEQEQTQLKPRRLIIIVTPTSTKLPHQAVFLRRLANTIKLVPQPLLWIVVEAKTNSTELPEILRKSGIMVFGTWPTALLAAHRKKVKIEGPVCDSSQVIGWHLRNMNNETDTITPPIHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKFVKQVVLEDEAKIKGIPPEDCSKILLWRFNFRARTTSSH 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1824 293 MobiDBLite consensus disorder prediction 51 76 - -
Aed2g1824 293 Pfam Glycosyltransferase family 43 174 284 IPR005027 GO:0015018|GO:0016020
Aed2g1824 293 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 173 IPR005027 GO:0015018|GO:0016020
Aed2g1824 293 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 173 291 IPR005027 GO:0015018|GO:0016020
Aed2g1824 293 MobiDBLite consensus disorder prediction 51 83 - -
Aed2g1824 293 SUPERFAMILY Nucleotide-diphospho-sugar transferases 116 289 IPR029044 -
Aed2g1824 293 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED 1 173 - -
Aed2g1824 293 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED 173 291 - -
Aed2g1824 293 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 115 173 IPR029044 -
Aed2g1824 293 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 174 293 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1824 Aed-Chr2 23036554 23039266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1824 1 289 Glycosyltransferase AT2G37090 44.068 1.83e-80 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1824 K20869 - gmx:100803434 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1824 2 23036554 23039266 Aed2g1824 2 23036554 23039266 ECH
Aed2g1824 2 23036554 23039266 Aed8g0382 8 3154428 3156654 PCT