Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1821 ATGGAGCCTTCACTCCTACTTCTTTCTTCATCTTCATCATCCACCCCTTTACCCTTCTTCATCTCAAACTCTCTTCATTTTCATCCAAAACCCAAACTTTCTACCAAACTCAATTGCACCCTGCAAAAGTCCCAATTTTGGGGCACAAACTTGAGTTGGGTCCCATCACAATCGCACCATCATGGAGTGAGGCCCATAATAACAACAGCAGCAGCGGTGAAGAGAAGGAAAGAGCTTCCCTTCGACAACGTTATCCAGAGGGACAAGAAGCTCAAATTCGTGCTCAAGGTAAGGAACATTCTAGTGACTCAACCAGATAGGGTTATGTCTCTTAAGAGCCTTGGTAAGTTCAAAAGAGATTTGGGCCTCGATAAAAAGAGGAGACTCATTGCCGTATTGAAGAAATTCCCAGCAGTGTTTCAGATTATGGAAGAAGGGGTTTACTCCCTCAAATTCAGATTGACCCCTGAAGCTGAGAGGCTCTATTTTGAGGAAATTAGGGTTAGGAATGAGATGGAAGAGTTGGTGGTTGTAAAACTCAGGAAGTTGTTGATGATGTCACTCGAAAAACGGATTTTGTTGGAGAAAATTGCACATCTCAAGACTGATTTGGGTCTCCCACAGGAATTTCGTGACACCATTTGTCATAGGTACCCTCAGTACTTCAAAGTGGTTGCAACTCAGCGTGGCCCTGCTTTGGAATTGACTCATTGGGACCCTGAGCTCGCGGTATCGGCAGCCGAGCTAGCAGCGGAGGAGAATCGCATTAGGGAAATGGAGGAGCAGAATTTGATCATAGACAGGGCCCCCAAGTTCAATAGGGTGAAGCTTCCCAAGGGTCTTAATCTTTCCAAGGGTGAGATGAGAAAGATTATGCAATTCAGAGACTTGTCTTATATTTCGCCTTATTCGGATTTCTCAGGACTGAGGCCGGGATCAAGGGAGAAGGAGAAGCATGCTTGTGGAGTTGTTCATGAGATTTTGAGCCTCACGCTTGAGAAGCGAACGCTGGTTGATCACCTTACACATTTTCGTGAGGAGTTCAGATTCTCTCAGCAGGTGAGGGGGATGTTGATAAGGCATCCCGATATGTTTTATGTCTCTCTGAAAGGAGATAGGGATTCTGTGTTTCTGAGGGAAGGTTATCGAGATTCTCAGTTGGTGGAGAAGGACCGGTTGTTGCTTATAAAGGAAAAGTTCCGTACCCTGGTTAATGTTCCACGGTTTCCCAAGGGACCTGCTCGCAGGATAGTTGAAGATAGCACTAGAGGAAGTGATAGCAGAGAAGATGAAAGTGGTGAAGAGGAAGAAGAATGGCCAGAAGAAGTTGACGATTTAATGAGTGATGATGATGTTGATGACTGGAGCGATGAAGATGGTGACGATTTGCCGCCAGATTTTGAAGAGGATGCTGAACTATTGGAGATTAGACAAGGAAGAAAGACAATTAAGCAAGACTCGAGACAGAATGATGAAAAGGTCCTTCTTCCTGTATTCTCTGATGGCAGTCCCAGAGAACAATGGTGA 1527 0.4506 MEPSLLLLSSSSSSTPLPFFISNSLHFHPKPKLSTKLNCTLQKSQFWGTNLSWVPSQSHHHGVRPIITTAAAVKRRKELPFDNVIQRDKKLKFVLKVRNILVTQPDRVMSLKSLGKFKRDLGLDKKRRLIAVLKKFPAVFQIMEEGVYSLKFRLTPEAERLYFEEIRVRNEMEELVVVKLRKLLMMSLEKRILLEKIAHLKTDLGLPQEFRDTICHRYPQYFKVVATQRGPALELTHWDPELAVSAAELAAEENRIREMEEQNLIIDRAPKFNRVKLPKGLNLSKGEMRKIMQFRDLSYISPYSDFSGLRPGSREKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQVRGMLIRHPDMFYVSLKGDRDSVFLREGYRDSQLVEKDRLLLIKEKFRTLVNVPRFPKGPARRIVEDSTRGSDSREDESGEEEEEWPEEVDDLMSDDDVDDWSDEDGDDLPPDFEEDAELLEIRQGRKTIKQDSRQNDEKVLLPVFSDGSPREQW 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1821 508 MobiDBLite consensus disorder prediction 415 508 - -
Aed2g1821 508 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 13 466 IPR040293 GO:0000373|GO:0003723
Aed2g1821 508 MobiDBLite consensus disorder prediction 470 491 - -
Aed2g1821 508 Pfam Plant organelle RNA recognition domain 77 405 IPR021099 GO:0003723
Aed2g1821 508 MobiDBLite consensus disorder prediction 415 429 - -
Aed2g1821 508 MobiDBLite consensus disorder prediction 430 469 - -
Aed2g1821 508 Coils Coil 242 269 - -
Aed2g1821 508 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 13 466 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1821 Aed-Chr2 22994416 22995942 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1821 - - gmx:100810556 811.986