Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1810 ATGTTCCTTTCACTGATCAGATACTCCTTCACTCTCTTCCTCTTATCACCTTCACACATTGCTTCAACAACAACACCATCAGCCACCAAAATAGCCATCACAAACCGAAACAACAACAACATCCAAAGCCTCCTCAACAATGCTAGAAGAGGCACCAAAATCACAGGCATATCGCAATTCAAACGATACCTCCATCGCTTCGGGTACTTACTACAAAACAACAACAATAGTAGTTTCAGTGATGAATTTGATGCCACGTTGGAATCGGCTCTCGTTAGATACCAACGAAACCTTGGACTCCAAGTAACCGGGAAGCTCGATTCCAACACGGTTTCTCAAATGATCACACCAAGATGCGGTGATGCAGACACAAACATAACACCCCACAATCACGTTCACAACGTGCATTCATCAAAGCATTTTGAGTTTTTCCCAGGAAAACCACGTTGGTCACGTCCCATGCCAATGACATTAACCTATGCCTTCTCACGTGACAACATGATCCATGGTGATCATTTGAGCATGAATGAGATAAGAGAGGCATTCCAACGTGCATTCACAAGGTGGGCTTCGGTTATTCCGGTTAGTTTCGTTGAGGTAAGTGACTTTGAACTAACCGACATCAAAATAGGGTTTTATAACGGGGAGCATGGCGACGGTGAGCCCTTTGATGGGGTTCTTGGAGTGTTGGCACACTCCTTCTCGCCGGAGATTGGCCGGCTCCACCTCGATGCGGCCGAGACGTGGGCCGTGGACTTCCGCTCGACTGCGTCCGAGGTGGCGGTGGACTTGGAGTCGGTGGCAACACATGAGATTGGACACTTGTTAGGGTTGTCTCATAGTACGGTCAAAGAGGCTGTTATGTATCCAAGTTTGAGGCCTAGGGATAAGAGGGCTGATTTGAACATTGATGACATCAAAGGGGTGCAATCTCTATATGGTTCAAACCCTAATTTCAGATCCCAATGGTCACTAGAGTCTGATATGTCCGCAAATCATGGTTCCGAATTTGTCAAACCTTTGAGGTTGGCTTCTAGTTTGATAATTATAATTTCTATCATTCATAGTTTATGTTCATAA 1080 0.4546 MFLSLIRYSFTLFLLSPSHIASTTTPSATKIAITNRNNNNIQSLLNNARRGTKITGISQFKRYLHRFGYLLQNNNNSSFSDEFDATLESALVRYQRNLGLQVTGKLDSNTVSQMITPRCGDADTNITPHNHVHNVHSSKHFEFFPGKPRWSRPMPMTLTYAFSRDNMIHGDHLSMNEIREAFQRAFTRWASVIPVSFVEVSDFELTDIKIGFYNGEHGDGEPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFRSTASEVAVDLESVATHEIGHLLGLSHSTVKEAVMYPSLRPRDKRADLNIDDIKGVQSLYGSNPNFRSQWSLESDMSANHGSEFVKPLRLASSLIIIISIIHSLCS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1810 359 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 143 317 - -
Aed2g1810 359 PRINTS Matrixin signature 267 292 IPR021190 GO:0004222|GO:0006508|GO:0008270
Aed2g1810 359 PRINTS Matrixin signature 114 127 IPR021190 GO:0004222|GO:0006508|GO:0008270
Aed2g1810 359 PRINTS Matrixin signature 206 234 IPR021190 GO:0004222|GO:0006508|GO:0008270
Aed2g1810 359 PRINTS Matrixin signature 301 314 IPR021190 GO:0004222|GO:0006508|GO:0008270
Aed2g1810 359 PRINTS Matrixin signature 182 197 IPR021190 GO:0004222|GO:0006508|GO:0008270
Aed2g1810 359 PANTHER MATRIX METALLOPROTEINASE 32 353 - -
Aed2g1810 359 CDD ZnMc_MMP 149 314 IPR033739 GO:0008237|GO:0008270
Aed2g1810 359 PANTHER METALLOENDOPROTEINASE 4-MMP 32 353 - -
Aed2g1810 359 Pfam Matrixin 157 314 IPR001818 GO:0004222|GO:0006508|GO:0008270|GO:0031012
Aed2g1810 359 Gene3D Collagenase (Catalytic Domain) 45 320 IPR024079 GO:0008237
Aed2g1810 359 Pfam Putative peptidoglycan binding domain 57 114 IPR002477 -
Aed2g1810 359 SUPERFAMILY PGBD-like 50 123 IPR036365 -
Aed2g1810 359 SMART col_5 146 315 IPR006026 GO:0006508|GO:0008237|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1810 Aed-Chr2 22782362 22783441 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1810 - K07999 gmx:100781237 542.347