Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1788 ATGGCTCAAGCAATGGCATCAATGGCTGGCTTGAGTGGCTCCACACGCTTGAATGTGGGGAGTGGCAGCAGGGTGGCCTCAGTCACACGTGCAGGGCTCACAATTAGAGCACAACAGCAACAACAAGTGAGTGGTGATGTACAAAGTAGCCGTAGGGCAATGCTTTCTCTTGTTGCTGCTGCTGGAACATTGAACTCAGATGAAGCAAGAGACCTTGATCTGCCATTGAAAGAAAGGTTCTTCCTTCAAGCATTGTCTCCTACTGAGGCTGCACAAAGGGCAAAGGAATCAGCCAAGGAAATTGTTGGTGTTAAGAAGTTGATTGAAAAGAAGGCTTGGCCATATGTTCAGAATGATTTGCGTCTCAGGGCAGAGTATCTGCGCTTTGATCTCAACACTGTCATTGCTGCAAAACCTAAGGACGAGAAGAAATCACTCAAGGAACTCACTGGAAAGCTCTTCCAGGATATCAGCAATCTGGATCATGCAGCAAAAATTAAGAGCAGCCCAGAAGCAGAGAAGTACTATGCTGCTACTATTTCTTCTCTGAATGATGTCCTTGCCAAACTTGGTTAA 576 0.4618 MAQAMASMAGLSGSTRLNVGSGSRVASVTRAGLTIRAQQQQQVSGDVQSSRRAMLSLVAAAGTLNSDEARDLDLPLKERFFLQALSPTEAAQRAKESAKEIVGVKKLIEKKAWPYVQNDLRLRAEYLRFDLNTVIAAKPKDEKKSLKELTGKLFQDISNLDHAAKIKSSPEAEKYYAATISSLNDVLAKLG 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1788 191 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 62 191 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Aed2g1788 191 Gene3D - 52 191 IPR023222 -
Aed2g1788 191 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 61 191 - -
Aed2g1788 191 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 5 61 - -
Aed2g1788 191 SUPERFAMILY Oxygen-evolving enhancer protein 3, 80 190 IPR023222 -
Aed2g1788 191 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 61 191 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Aed2g1788 191 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 5 61 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1788 K08901 - gmx:100306034 305.064