Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1722 ATGTATGGCGGTGATGAAGTATCAGCTATAGTGTTTGACTTGGGTTCACATACGTGCAAAGCTGGCTATGCCGGTGAAGATGCTCCCAAGGCCGTGTTTCCTTCTGTGGTTGGAGCAACTGATCAAATGGATGTTGATGAAGCAGATAATGGTGAAAATAACTCTGCCTCTGCTCCGGAATCAAATAATAATAATGTTAGAAATGCTGATTCTGACAAGGCTAAGGGAAAGAGGAAATTGTTTGTAGGAACCCAGTCCCTGGGGTACCGTAGAGACCATATGGAGGTGCTGTCTCCATTCAAGGATGGAGTTGTTGCTGACTGGGATATTGTTGACAGCATATGGGATCATGCCTTCAGGGAGTGCCTATTGATTGATCCTAAAGAGCATCCTATGCTCCTTGCAGAGCCCTCTTCTAACTCTCAACAACAGAGAGAAAGGACAGCAGAGCTTATGTTTGAGAAGTACAAAGCACCTGCACTGTTTTTGGCAAAGAATGCTGTTCTGACTTCTTTTGCATCAGGGCGTGCTACATCATTGGTTGTTGATGGTGGTGGAGGCTCAACTACAGTTGCACCAGTACATGATGGTTATGTTCTTCAAAAGGCTGTGGCAACCTCTCCAATTGGAGGAGAATTTCTTACAGACTGCTTGATGAAAAGCTTGGAAAGCAAGGGTATTACGATGAAACCACGGTATTCCTTTAGGAGAAAGGAAATACGCCCTGGAGAGTTTCAGACAGTAGATATTGAGTTTCCAAATACTTCTGAAAGCTACAAACTCTATTCCCAGAGAGTGATTGCTAGTGATATCAAGGAATGTGTGTGCCGTGCTCCAGATACCCCATATGATGAGAGTGCATATTCAAACATCCCAATGACCTCATATGAGCTTCCTGATGGCCAGACAATTGAAATTGGAGCTGACAGATTTAAGATTCCAGATGTACTTTTCAATCCATCCCTGGTTCAGTCAATTCCTGGCATGGAGAGCTTTGCAGAAATTGCTCCTTCAGTTCGTGGCCTGCCACAAATGGTGATTGAAAGCATTAATAAGTGTGATGTAGACATTCGAAGAGAGTTGTTTAGTAGTATACTGCTTGCTGGTGGTACAGCTTCAATGCAGCAACTAAAGGAACGTCTTGAGAAAGACTTGCTAGAGGAGTCCCCTCAAGCTGCCAGAGTAAAAGTATTGGCTAGTGGGAATGCTACTGAAAGAAGGTTTAGTGTTTGGATAGGAGGTAGTATATTAGCATCTCTTGGCTCCTTCCAGCAAATGTGGTTCTCGAGATCTGAGTATGAAGAGCATGGAGCTTCATATATCCAAAGGAAGTGTCCATGA 1341 0.4377 MYGGDEVSAIVFDLGSHTCKAGYAGEDAPKAVFPSVVGATDQMDVDEADNGENNSASAPESNNNNVRNADSDKAKGKRKLFVGTQSLGYRRDHMEVLSPFKDGVVADWDIVDSIWDHAFRECLLIDPKEHPMLLAEPSSNSQQQRERTAELMFEKYKAPALFLAKNAVLTSFASGRATSLVVDGGGGSTTVAPVHDGYVLQKAVATSPIGGEFLTDCLMKSLESKGITMKPRYSFRRKEIRPGEFQTVDIEFPNTSESYKLYSQRVIASDIKECVCRAPDTPYDESAYSNIPMTSYELPDGQTIEIGADRFKIPDVLFNPSLVQSIPGMESFAEIAPSVRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSRSEYEEHGASYIQRKCP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1722 446 PANTHER - 2 445 - -
Aed2g1722 446 Gene3D - 1 181 - -
Aed2g1722 446 Gene3D - 182 385 - -
Aed2g1722 446 SUPERFAMILY Actin-like ATPase domain 175 445 IPR043129 -
Aed2g1722 446 Pfam Actin 4 445 IPR004000 -
Aed2g1722 446 PANTHER ACTIN 2 445 IPR004000 -
Aed2g1722 446 SUPERFAMILY Actin-like ATPase domain 5 182 IPR043129 -
Aed2g1722 446 MobiDBLite consensus disorder prediction 49 69 - -
Aed2g1722 446 Gene3D Actin; Chain A, domain 4 211 324 - -
Aed2g1722 446 MobiDBLite consensus disorder prediction 45 75 - -
Aed2g1722 446 Gene3D - 391 446 - -
Aed2g1722 446 SMART actin_3 7 446 IPR004000 -
Aed2g1722 446 CDD NBD_sugar-kinase_HSP70_actin 101 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1722 Aed-Chr2 21829650 21839998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1722 1 445 Miscellaneous Gene Families AT3G53750 35.268 1.25e-92 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1722 K11340 - gmx:100795390 842.802