Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1696 ATGTATCAGTGGAGGAAGTTCGAGTTCTTCGAGGAGAAGTACGGCGCCAAATGCGCGATTCCCGAGGCCGACGCAGGAGACGACGATGCCGCCATCGCCGCTGCCGCGGATAGGAAGATCGAGTGCTGTTCGAGCGGCAGGGGCAAGGTCGTCTCCGGCTTCAGCGACGGCGTCGTTTGCTTCTTCGATCGAGGCCTCAAGTTCAACTACACTTTCCAGCCTCACTCCTCTTCCGTTCTCTTTCTTCAGCAACTCAAGCAACGCAACTTGCTGGTAACAATTGGGGAGGATGAACAGCTTACTCCCCAGCAATCGACTCTGTGCCTCAAGGTTTTTGACCTTGACAAGATGCAGCCAGAGAGTTCGAGCACGACGAGTCCCGATTGCGTCGGGATATTGCGGATATTCACCAATCAGTTTCCTGAGGCAAAGATTACTTCATTTTTGGTTTTAGAAGAAGTGCCACCTATACTACTCATAGCTATTGGATTGGACAATGGCTCTATATACTGCATCAAAGGAGACATTGCCCGGGAGCGTATCACCCGTTTCAAGCTTCAGGTGGAAACCAACCATTCGGACAAAACTCTTTCTGCCATAACTGGACTTGGGTTTAAGGTGGATGGTCAATCTCTACAGTTATTCGCCGTGACTCCAAGTTCAGTGAGCTTGTTTTCGTTGCATGATCAGCCGCCGAGAAGGCAAACCCTTGATCAGATTGGATCTAGTGTGAACAGTGTTGCAATGAGTGATCGCTCTGAGTTGATAATTGGTCGACCAGAGGCAGTATATTTTTATGAAGTTGATGGGCGTGGTCCTTGTTGGGCTTTTGAGGGAGAGAAGAAATTGCTTGGATGGTTTCGTGGATACCTTTTGTGTGTTATTGCTGATCAAAGAACAGGAAAGCATACTTTCAACATCTATGACCTGAAGAATCGATTAATAGCCCACAGTGCATTGGTTAAAGATGTTTCTCATATGCTCTATGAATGGGGTAACATCATACTCATTATGAGTGACAAATCAGCTTTATGTATTGGAGAAAAGGATATGGAAAGCAAGCTAGACATGCTGTTCAAGAAAAACCTATATACGGTAGCAATTAATCTTGTACAGACTCAGCAAGCAGATGCTGCAGCTACTGCTGAAGTGCTAAGGAAATATGGGGATCATCTGTATAGCAAGCAAGACTATGATGAGGCAATGGCCCAGTACATACATACTATTGGTCATCTTGAACCTTCATATGTTATACAGAAGTTTTTGGATGCTCAAAGAATCTACAACCTCACAAATTACTTAGAGAAGCTACATGAGAAGGGTCTTGCTTCTAAAGATCACACCACACTTTTATTAAACTGTTACACTAAATTGAAAGATGTTGAAAAGTTAAATCTATTTATTAAAAGCGATGACAGCATTGGGGAACTTAAATTTGACGTGGAAACAGCGATCAGGGTTTGCCGTGCTGCCAACTACCATGAGCATGCAATGTATGTTGCAAGGAAGGCAGGGAGGCATGAATGGTACTTGAAGATCTTGCTTGAAGATCTTGGTAGCTATGAAGAAGCCTTGGAATATATTTCAAGCCTTGAATCAAGTCAGGCAGGTATGACAATAAAGGAGTATGGGAAGATTCTGATAGAGCACAAGCCAGTGGAGACAATTCAGATTCTCATAAGGCTTTGCACGGAAGATGGTGACAAAAGAGGACGCTCAAAGGGAGTGTATATGTCTATGTTGCCATCTCCTGTTGATTTTCTTAGCATTTTCATTCATCAGCCTCATTCCCTTATGGATTTTTTAGAAAAATATACCAATAAGGTCAAGGACTCACCTGCTCAAGTTGAGATTCACAATACCCTCTTAGAGTTGTACATATCCAATGAATTGAACTTTCCTTCAATGTCGCAAGTTAATGATGGTGGAGATTACCTTAATGGAGTATCCGCAAAAACTAAGATTTTAAGTGCCAAGTCTAATGGAAACATTGCTTCAGAACAGGAAAAGGGCCGTCTTGAAAGGCGTGAAAAGGGTTTGCGCTTACTTAAGAGTGCATGGCCTCCAGAGACAGAACATCCACTATATGATGTTGATTTAGCTATTATACTATGTGAAATGAATGCGTTCAAAGATGGGATTTTGCATTTGTATGAAAAGATGAAGCTCTATAAAGAAGTGATTGCTTGCTATATGCAGGCACATGATCATGAAGGGTTAATTGCATGCTGCAAAAGGTTGGGGGATTCAGTTCAAGAAGGGGACCCATCTCTTTGGGCAGATCTACTTAAATATTTTGGTGAGCTTGGAGAAGATTGTTCTACAGAAGTAAAAGAAGTTCTGACATATATTGAGAGACATGACATTTTACCCCCTATGATTGTGCTTCAAACTCTTTCCCGAAATCCATGCCTCTCACTTTCTGTGGTCAAAGATTACATTGCCCGAAAGCTTGAGCGGGAATCAAAGATGATTGAGGAGGACCGACACGCTATTGAGAAATATCAGGAAGATACACTGTCAATGAGAAAAGAGATTGAAGATCTTAGGACAAATGCTAGAATTTTTCAGCTTAGCAAGTGCACTGCATGCACCTTCACCCTTGATCTTCCTGCTGTGCACTTCATGTGCATGCACTCATTCCACCTGCGCTGCCTTGGTGATAATGAAAAAGAATGCCCTGAGTGTGCTCCTGAATATAGATCTGTCTTGGAAATGAAAAGAAATTTAGAGCAAAATTCTAAGGATCAGGACAGGTTTTTTCAGCAGGTGAAGAGTTCTAAGGATGGGTTTTCTGTCATTGCTGAATATTTTGGAAAAGGGATCATCAGCAAAATAAGCAATGGATCCTCTTCTGGTCCCAGATCCGAAACTGCATCATCCACTAGCGGTTTCTAA 2898 0.4268 MYQWRKFEFFEEKYGAKCAIPEADAGDDDAAIAAAADRKIECCSSGRGKVVSGFSDGVVCFFDRGLKFNYTFQPHSSSVLFLQQLKQRNLLVTIGEDEQLTPQQSTLCLKVFDLDKMQPESSSTTSPDCVGILRIFTNQFPEAKITSFLVLEEVPPILLIAIGLDNGSIYCIKGDIARERITRFKLQVETNHSDKTLSAITGLGFKVDGQSLQLFAVTPSSVSLFSLHDQPPRRQTLDQIGSSVNSVAMSDRSELIIGRPEAVYFYEVDGRGPCWAFEGEKKLLGWFRGYLLCVIADQRTGKHTFNIYDLKNRLIAHSALVKDVSHMLYEWGNIILIMSDKSALCIGEKDMESKLDMLFKKNLYTVAINLVQTQQADAAATAEVLRKYGDHLYSKQDYDEAMAQYIHTIGHLEPSYVIQKFLDAQRIYNLTNYLEKLHEKGLASKDHTTLLLNCYTKLKDVEKLNLFIKSDDSIGELKFDVETAIRVCRAANYHEHAMYVARKAGRHEWYLKILLEDLGSYEEALEYISSLESSQAGMTIKEYGKILIEHKPVETIQILIRLCTEDGDKRGRSKGVYMSMLPSPVDFLSIFIHQPHSLMDFLEKYTNKVKDSPAQVEIHNTLLELYISNELNFPSMSQVNDGGDYLNGVSAKTKILSAKSNGNIASEQEKGRLERREKGLRLLKSAWPPETEHPLYDVDLAIILCEMNAFKDGILHLYEKMKLYKEVIACYMQAHDHEGLIACCKRLGDSVQEGDPSLWADLLKYFGELGEDCSTEVKEVLTYIERHDILPPMIVLQTLSRNPCLSLSVVKDYIARKLERESKMIEEDRHAIEKYQEDTLSMRKEIEDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHLRCLGDNEKECPECAPEYRSVLEMKRNLEQNSKDQDRFFQQVKSSKDGFSVIAEYFGKGIISKISNGSSSGPRSETASSTSGF 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1696 965 Pfam Vacuolar protein sorting protein 11 C terminal 901 943 IPR024763 -
Aed2g1696 965 Pfam Region in Clathrin and VPS 413 536 IPR000547 GO:0006886|GO:0016192
Aed2g1696 965 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 405 556 IPR000547 GO:0006886|GO:0016192
Aed2g1696 965 Coils Coil 818 852 - -
Aed2g1696 965 Gene3D Tetratricopeptide repeat domain 353 639 IPR011990 GO:0005515
Aed2g1696 965 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 572 775 IPR000547 GO:0006886|GO:0016192
Aed2g1696 965 ProSiteProfiles Zinc finger RING-type profile. 861 896 IPR001841 -
Aed2g1696 965 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 11 HOMOLOG 3 944 IPR016528 -
Aed2g1696 965 CDD RING-H2_Vps11 859 899 - -
Aed2g1696 965 SUPERFAMILY WD40 repeat-like 42 262 IPR036322 GO:0005515
Aed2g1696 965 PIRSF Vps11 575 951 IPR016528 -
Aed2g1696 965 PIRSF Vps11 1 581 IPR016528 -
Aed2g1696 965 Gene3D - 37 325 IPR015943 GO:0005515
Aed2g1696 965 SUPERFAMILY RING/U-box 834 901 - -
Aed2g1696 965 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 3 944 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1696 K20179 - gmx:100793279 1773.83