Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1680 ATGGCTACAAGGCCTGGGATCCTCACTGATTGGCCATGGAAGCCACTTGGAAACTTTAAGGTTAAATATCTGTTACTAGCTCCTTGCGTGATTCATAGCTTGTATTCTATGATGGTAAAAGATAAGAGTGAAAGGGACATATTTAACTTTCTCATATTACCATTTTTGCTTTGGCGTATGCTTCATAACCAAATATGGATCACTCTCTCTCGTTATCGAACCGCCAAAGGCAACGCTAGAATTGTTGACAAGGGAATTGAATTTGATCAATTATGGCAATATTGCTTCATATGGGACCAGTGGAGTTTCTCTATTATTGGCTACACAGAGCACTTCATCATCACTTCCTCTACTCTCGATACCATTCTCACCACCATGCTTCTATTGCCACAGAACCCATTACTTCACGTATCATATTCCTTTATCTTTGCAATATGCTTATTAACCCTCGTTTTTACAAAAACGGCTTCTATCGTGGTTGCGTTTGGATACGTGACTTACATTGATTTTATGAATAATATGGGTCACTGCAACTTTGAGATTGTTCCAACTTGGCTCTTTCACATCTTTCCTCCTCTCAAGTATCTCATGTACACTCCATCGTTTCACTCTTTGCATCACACCCAGTTCAGAACAAACTACTCTCTATTCATGCCATTCTATGACTACATCTATGGCACAATGGACAATGCTTCAGATCAACTACATGATTCATCATTAAAAAGAAAGGAAGATACCCCAGATGTTGTGCACTTGACACACCTCACTACACCTGAATCAATCTATCATCTAAGGCTTGGATTTGCTTACCTTGCTTCCAAACCCTACACACCAAAATGGTACCTTTGTTTGATGTGGCCCATGACTGTTTGGTCCATGTTTCTCACTTGGACCTGTGGTTGCACATTCACTGTGGATGGGAGTCGTTTTGACAAACTCAAACTGCAAACTTGGGCAATACCTAAGTACAGCTATGAATACTTTCTACAATCGAAAAAAGGGGCCATCAACAAAATGATAGAGGAAGCAATACTAGATGCTGACAGAAAAGGCATAAAAGTGTTGAGCCTAGGCCTCATGAATCAAGGAGAAGAGCTTAACATCTATGGAGGATTATATGTTAGTCAAAATCCAAAGCTAAAAGTTAAGATTGTAGATGGAAGTAGCCTTGCTGCTGCTGTTGTTCTTAACAATATTCCTAAAGTAACAACACAAGTTTTACTCATGGGAAAACTCACCAAGGTTGCTTATGCTCTGGCCTTCACATTGTGTCAACGAGGCATTAAGACATGGTTAGTGGAAGATGAACTAACTGAAGAGGAACAACTAAAGGCACCCAAAGGTACACTATTCATTCCATATTCACAATTCCCACCAAGGAAATACCGTAAGGATTGCTTCTATCATTGCACCCCAGCAATGCTAATTCCCACTTGTGTTGAAAATGTCCATTCTTGTGAGGATTGGTTGCCAAGGAGGGTAATGAGTGCATGGCGAATAGCTGGGATAGTGCATTCTTTAGAAAAATGGAGTGCACATGAATGCAACCACACAATGCATAACATAGACAAAGTTTGGCATTCAACTCTTCAACATGGGTTTCAACCTCTTACTTCTCCAATCAAAGAGTTGGTTCATTGTTAA 1644 0.4002 MATRPGILTDWPWKPLGNFKVKYLLLAPCVIHSLYSMMVKDKSERDIFNFLILPFLLWRMLHNQIWITLSRYRTAKGNARIVDKGIEFDQLWQYCFIWDQWSFSIIGYTEHFIITSSTLDTILTTMLLLPQNPLLHVSYSFIFAICLLTLVFTKTASIVVAFGYVTYIDFMNNMGHCNFEIVPTWLFHIFPPLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYGTMDNASDQLHDSSLKRKEDTPDVVHLTHLTTPESIYHLRLGFAYLASKPYTPKWYLCLMWPMTVWSMFLTWTCGCTFTVDGSRFDKLKLQTWAIPKYSYEYFLQSKKGAINKMIEEAILDADRKGIKVLSLGLMNQGEELNIYGGLYVSQNPKLKVKIVDGSSLAAAVVLNNIPKVTTQVLLMGKLTKVAYALAFTLCQRGIKTWLVEDELTEEEQLKAPKGTLFIPYSQFPPRKYRKDCFYHCTPAMLIPTCVENVHSCEDWLPRRVMSAWRIAGIVHSLEKWSAHECNHTMHNIDKVWHSTLQHGFQPLTSPIKELVHC 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1680 547 PANTHER FATTY ACID HYDROXYLASE SUPERFAMILY PROTEIN 1 104 - -
Aed2g1680 547 PANTHER FATTY ACID HYDROXYLASE SUPERFAMILY PROTEIN 135 429 - -
Aed2g1680 547 PANTHER FATTY ACID HYDROXYLASE SUPERFAMILY PROTEIN 429 540 - -
Aed2g1680 547 PANTHER STEROL DESATURASE 135 429 - -
Aed2g1680 547 PANTHER STEROL DESATURASE 429 540 - -
Aed2g1680 547 Pfam Fatty acid hydroxylase 135 227 IPR006694 GO:0005506|GO:0008610|GO:0016491
Aed2g1680 547 Pfam WAX2 C-terminal domain 428 536 IPR021940 -
Aed2g1680 547 PANTHER STEROL DESATURASE 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1680 Aed-Chr2 21285084 21292311 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1680 1 537 Lipid Metabolism Gene Families AT1G02190 46.314 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1680 K15404 - gmx:100818020 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1680 2 21285084 21292311 Aed2g1680 2 21285084 21292311 ECH