Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1664 ATGTTTGGTATCCTATCATGGATGGGACAATTCTTCATCAAGTTACAAGGTAAGGAGTGGAGGAAAAGGCAAATAAGAAGGATAACAGACAGAGTTTTTGACCAATTCTGTGATGGTGACGAGGACGGGGAGATTAACTGTGACGAATTTTTTGGTTTCTTCGAGCAAATGGCACCTGAAATATTCAGTGTTGTTCGTAGAAAACTTGTTGCCACTTTGGTTGCAGCACCAACAGTTGCAGTGACAACAAAGAAAGCTACTGAACGTGTCCCAGTTGTTGGGAAACTGGTGCAGTGGTTTCCCAAAGCAGTTTATGCTTTCCTTATAACAATTGTAGCTGTGTGGTACCAAGAGAACGTTCAGGATTCTTCACACTAG 378 0.4206 MFGILSWMGQFFIKLQGKEWRKRQIRRITDRVFDQFCDGDEDGEINCDEFFGFFEQMAPEIFSVVRRKLVATLVAAPTVAVTTKKATERVPVVGKLVQWFPKAVYAFLITIVAVWYQENVQDSSH 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1664 125 PANTHER S100 CALCIUM-BINDING PROTEIN 11 36 - -
Aed2g1664 125 PANTHER S100 CALCIUM-BINDING PROTEIN 35 122 - -
Aed2g1664 125 PANTHER CALCIUM-BINDING EF HAND PROTEIN 11 36 - -
Aed2g1664 125 PANTHER CALCIUM-BINDING EF HAND PROTEIN 35 122 - -
Aed2g1664 125 ProSitePatterns EF-hand calcium-binding domain. 38 50 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1664 Aed-Chr2 21044400 21046932 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1664 8 119 EF-hand Containing Proteins AT1G64850 36.875 5.85e-31 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1664 - - gmx:100782930 170.629