Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1621 ATGGCTTCCCCCTCCAAAGACGATGACCAACAGGTTCTGGTGCAGCGTAAATCAAATGCGAGAGTTTTGACACTAAACAGGACTAAGCAGTTGAATGCTCTCTCTTTTTATATGGTTTCTCGGCTACTTGAAATTTTTTCTGAAGATGAGGAAAATTCTGATATTAAATTGGTTGTCGTGAAGGGAAATGGAAGGGCTTTTTGTGCTGGTGGTGATGTTGCAGCTGTTGCTCGTGATGGAAGTAAAGGTGACTGGAGGTTTGGTGCAAATTATTTTCATACTGAATTTAAGTTGAATTACTTGATAGCAACATATAGTAAGCCCCAGGTTTCAATTCTTAATGGAATTGTCATGGGAGGTGGTGCTGGTGTCTCTGTACATGGAAGATTTCGTGTTGTTACAGAGAATACGGTCTTTGCAATGCCAGAAACAGCTTTGGGTTTATTTCCTGATATAGGTTCCTCATATTTCCTGTCTAGACTGCCCGGATTTTTTGGAGAATATGTTGGTCTTACAGGTGCTAGGTTGGATGGTGCAGAAATGCTTGCTTGCGGTCTTGCAACACATTTTGTTCCATCATCAAAATTGTCTTTATTGGAAGAAGCATTATGCAAGGTGGAAACTAGTGATCCAGATGCGGTGTCTGCAATTATCAATAAGTATTCGGAGCAACCTTTCCTAAAAGAGGATAGTGTTTATCACAGGATGGATGTGATCAATAAGAGCTTCTCTAAAAAAGCAGTTGAGAAAATCTTGTCTTCTCTCGAGGTGGAAGCTACGAGAAAGGCTGATCCTTGGATTTCTGCAACTATTCAATCCTTAAAGAAAGCATCTCCAACAAGCCTTAAAATTTTTCTTAAATTGGACACTACAGCAAGGATTTCTACGAGCGATGTTGATCGTTACTTCTCTAAGCTTGATGTTGAAGGATGGAAAGATTTGGAGCTTCCTAAAAGGTTCAACAATTTGCCTACATATGCTATTTCAAAGCTGTAA 996 0.3976 MASPSKDDDQQVLVQRKSNARVLTLNRTKQLNALSFYMVSRLLEIFSEDEENSDIKLVVVKGNGRAFCAGGDVAAVARDGSKGDWRFGANYFHTEFKLNYLIATYSKPQVSILNGIVMGGGAGVSVHGRFRVVTENTVFAMPETALGLFPDIGSSYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSSKLSLLEEALCKVETSDPDAVSAIINKYSEQPFLKEDSVYHRMDVINKSFSKKAVEKILSSLEVEATRKADPWISATIQSLKKASPTSLKIFLKLDTTARISTSDVDRYFSKLDVEGWKDLELPKRFNNLPTYAISKL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1621 331 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE 1 294 331 - -
Aed2g1621 331 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE 1 8 293 - -
Aed2g1621 331 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 294 331 IPR032259 GO:0003860
Aed2g1621 331 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 8 293 IPR032259 GO:0003860
Aed2g1621 331 CDD crotonase-like 12 203 - -
Aed2g1621 331 Pfam Enoyl-CoA hydratase/isomerase 21 293 IPR045004 -
Aed2g1621 331 Gene3D - 6 316 - -
Aed2g1621 331 SUPERFAMILY ClpP/crotonase 10 284 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1621 Aed-Chr2 20439174 20446681 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1621 1 331 Miscellaneous Gene Families AT5G65940 56.806 7.36e-151 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1621 K05605 - gmx:100170729 563.918