Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1620 ATGGCTTCAAATTCCAGCACTACCAACGCTGGCTACCCCATCAAAACGATCGTCGTTTTGGTTCAAGAAAACCGTTCCTTCGACCACATGCTCGGTTGGATGAAGTCCCTCAATCCGGAAATCAACGGAGTCACCGGGTCAGAGTCAAACCCGGTTTCCACATCCAACCCCAACTCGAACCGGGTACAATTCTCGAACCGGTCGGTCTACGTAGACCCGGACCCGGGACACTCCATCCAAGACATCTACGAGCAGATCTTCGGAGAGCCCTGGAGCGAAGCCTCGGCGGCAAAGAAATTGCCACCAACCATGCAAGGCTTCGCTCAAAACGCCACGAGACAAGCGGTGCCAAAGAATGCTACGACGACAATGACAGAAGCGGTGATGAACGGGTTCAAACCGGACTCGATTTTGGTTTACAAAGAGTTGGTTAAGGAGTTTGCGGTTTGCGACCGTTGGTTCGCTTCGGTTCCTGCCTCGACCCAACCGAACCGGCTCTATGTGCATTCCGCCACGTCACATGGGTTGACAAGTAATGACACAAACAAGCTTATTGGTGGGTTGCCTCAGAAGACAATATTTGATTCTCTTGATGAAAATGGGTTCAGTTTTGGGATCTATTATCAGGCTCCACCTGCCACCCTTTTGTATAGGAATCTTAGGAAACTGAAATACGTAGACAACTTCCATCCATTCGACACGTTCAAAAAGCATTGCAAAGAAGGGAAACTACCCAACTACGTGGTGATCGAGCAAAGGTTTTTCGACTTATTATCACTTCCGGCGAATGATGATCACCCATCTCATGATGTTTCTGAGGGTCAAAAGCTTGTGAAAGAAGTGTATGAAGCACTAAGAGGGGGCCCACAGTGGAATGAAACATTGTTTGTGATCATGTACGATGAGCATGGAGGGTTTTGTGATCATGTTCCAACACCTGTGGAAGGGGTTCCTAGTCCTGATGACATTGTGGGTCCTGAACCATTTAGGTTTAGGTTTGATAGGCTTGGTGTGAGGATTCCAGCCATCATTGTTTCTCCATGGATTGAGCCAGGCACAGTGTTACACGGGCCTTCTGGACCATTTCCAACATCACAATATGAGCATTCATCTATACCAGCAACAGTGAAGAAGATATTCAATTTGCCAGAATTTCTGACAAAGAGAGATGCATGGGCTGGAACATTTGAAGGTCTTTTAACTAGAACCACCCCACGAACTGATTGTCCAGTGAAATTGGCTGACCCTGTGAAACTACGAGAAGCACTTGCTCATGAAAAGGCCCAATTGAGTGAATTTCAAGAAGAATTGGTACAAATGGCAGCAACACTAAATGGTGATCATAGAAAGAGTGTATACCCAGACAAGTTAACTGAGAACATGAGTGTTCCGGAAGCAGTTAAATACGTTGAAGATGCATTCAACACATTCTTGAATGAGTGTGAGAAGGCAAAGCAAAATGGTGCTGATGAATCTGAAATTGTGGAATGTGCTGATGGATGTAGTAGTAGTGCTACCAATGATTCCAGAAATTTCTTTGACAGTGTGTTGTCTTGTATAACATGTAATCGAAATAATTAA 1581 0.4554 MASNSSTTNAGYPIKTIVVLVQENRSFDHMLGWMKSLNPEINGVTGSESNPVSTSNPNSNRVQFSNRSVYVDPDPGHSIQDIYEQIFGEPWSEASAAKKLPPTMQGFAQNATRQAVPKNATTTMTEAVMNGFKPDSILVYKELVKEFAVCDRWFASVPASTQPNRLYVHSATSHGLTSNDTNKLIGGLPQKTIFDSLDENGFSFGIYYQAPPATLLYRNLRKLKYVDNFHPFDTFKKHCKEGKLPNYVVIEQRFFDLLSLPANDDHPSHDVSEGQKLVKEVYEALRGGPQWNETLFVIMYDEHGGFCDHVPTPVEGVPSPDDIVGPEPFRFRFDRLGVRIPAIIVSPWIEPGTVLHGPSGPFPTSQYEHSSIPATVKKIFNLPEFLTKRDAWAGTFEGLLTRTTPRTDCPVKLADPVKLREALAHEKAQLSEFQEELVQMAATLNGDHRKSVYPDKLTENMSVPEAVKYVEDAFNTFLNECEKAKQNGADESEIVECADGCSSSATNDSRNFFDSVLSCITCNRNN 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1620 526 Coils Coil 423 443 - -
Aed2g1620 526 Pfam Phosphoesterase family 14 383 IPR007312 GO:0016788
Aed2g1620 526 SUPERFAMILY Alkaline phosphatase-like 158 358 IPR017850 -
Aed2g1620 526 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 9 509 IPR007312 GO:0016788
Aed2g1620 526 Gene3D Alkaline Phosphatase, subunit A 244 428 IPR017850 -
Aed2g1620 526 Gene3D Alkaline Phosphatase, subunit A 3 196 IPR017850 -
Aed2g1620 526 PANTHER NON-SPECIFIC PHOSPHOLIPASE C3 9 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1620 Aed-Chr2 20428766 20433330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1620 1 492 Acyl Lipid Metabolism Gene Families AT3G03530 66.333 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1620 K01114 - gmx:100805391 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1620 2 20428766 20433330 Aed2g1620 2 20428766 20433330 ECH