Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1618 ATGAAAGATACTTTTTTATTAATTTTTTTTTTTATCACTGCTTATACCACTGATTTGCACCAGGTTGTGTTTTGCAAAAAGAGAAAGAAGCAGATGGCTGATGTTGTGTTTGAGATTGAAGATGAGTTGTTGCAACAACAACAACAACAATCATCACTACTAGAGGAGAAAAGGCCATTATTGCTAGATGTGAGAAACCGGCGAGGTGAAACCCCTTTGTTCATGGCTGCGATGCATGGAAAGATAACAATGCTTAAGCACATGGCTAAACGTGTAGGCATACATAATACGGAAGCTTTTAGAAACCATTTGCATCGATCTGACAAATATTCTGCTCTTCATGCCAGTCTCATGGGACAACATTTTGACGTTGCAATTTGGCTATTAAGAAAGGATAAGGAACTTGCAATTTGGCTATTAAGAATGGATAAGGAAATTGCGATGGATCAAAAGGATGGGAAAAAATTAACTTGTCTTCAACTACTTGCCAAAATGCCACAGGTTTTTCGAAGCTACACTGACATGGGACTTCTGAAGAGCCTCTTATATTACTTGCTCCCTGAGGATGGATATGAATTTGAAGATGATGAAGAATTACAATTATTTATACACAAAAAAGACTTAGAAAATGGCGAAATGAATGAAGGAAAACCCCCCAAATCAGAGTTTGAAGGGATTGATCACATATGGAAGGAGAAGAAAAAACACAAGTTGGCTGAATCTCTAACAGATATTTTAGTGCAATATGACTTGTCATGGCAGATATCCTATAATGAGTATAAAAGAACAACAATTATTTCAATGCCACGTGACCCTATCAGTGTGGCCAAAAGGAGAAGGATAAGTGCACTAAAAAGGGAAGAGAGACGTAAGAACGATGAAGAACCTCCTGAACGCACAGCATTACTCATAGCAACTAAAACTGGGATTGTGGAAATTGTTGAAAGAATCCTTGATGATAATCCTGAGGCCATTTTTCATGTCACTGAGAATAAGCAGAACATCTTGACCATGGCTGTTAAGTATCGCCAGAAGAAAATTCTTCGAATCATACAAAGAAAATGTGCAATTAAATCATTGGTTGGTCAAATCTCAGACAAAGGTCGCACAATCTTGCATGAAGTTGCAAGGATGGATTACTACAAAGGGGAACACTTAGCAGGAGTTGCATTCCAACTACAAGATGAGTTGCGTTGGTATGATAGAGTGAGGAGACTAATCCCTAAACACTACAACATGCACTGCGACATAGACGGGCACACACCAGAAGACATGTTAGAAATGGAGCATGATGGAATGCTGAAAGAGGCACAGAAATGGTTAAAGGAAACAGCACAATCATGCTCCACAGTTGCCATTCTAGTTGCCACAGTTGTGTTTGCTGCAGCCTACACCATCCCCGGCGGGACCGAAAACGGAACCCCGGTGTTCCTTCACTCCGACGTCTTCATCCTTTTCACCACCATGGATGTTGTGGCTCTTGCAACCTCACTAGCCTCAGTGGTGGTGTTCCTCTCCATCCTCACTTCGCCGTGTGAGTTGTGGGATTTTCATAGGTCTCTCCCGCGAAAGCTGAATCTGGGATTTGCTTTGTTGTTCTTGTCGTTGTTGACGACAATGCTGGCTTTCAGTGCGACCATGTTGCTGACTATTCGGTTGGAGTGGAAGAATTGGACCTCGACATTGATATACAGTGCTGCTTTCTTTCCGGTCACTATATTTGCAATAGTTCAGTTCCCTGTTTATGTGATGGCTCAAACCATTGTCAAGTATCTTTGGAAGCAACTTAAGAAGGTCGTTCCAATGAGATTGATTAGTCATTTCACAATTCCCAATTGA 1839 0.4089 MKDTFLLIFFFITAYTTDLHQVVFCKKRKKQMADVVFEIEDELLQQQQQQSSLLEEKRPLLLDVRNRRGETPLFMAAMHGKITMLKHMAKRVGIHNTEAFRNHLHRSDKYSALHASLMGQHFDVAIWLLRKDKELAIWLLRMDKEIAMDQKDGKKLTCLQLLAKMPQVFRSYTDMGLLKSLLYYLLPEDGYEFEDDEELQLFIHKKDLENGEMNEGKPPKSEFEGIDHIWKEKKKHKLAESLTDILVQYDLSWQISYNEYKRTTIISMPRDPISVAKRRRISALKREERRKNDEEPPERTALLIATKTGIVEIVERILDDNPEAIFHVTENKQNILTMAVKYRQKKILRIIQRKCAIKSLVGQISDKGRTILHEVARMDYYKGEHLAGVAFQLQDELRWYDRVRRLIPKHYNMHCDIDGHTPEDMLEMEHDGMLKEAQKWLKETAQSCSTVAILVATVVFAAAYTIPGGTENGTPVFLHSDVFILFTTMDVVALATSLASVVVFLSILTSPCELWDFHRSLPRKLNLGFALLFLSLLTTMLAFSATMLLTIRLEWKNWTSTLIYSAAFFPVTIFAIVQFPVYVMAQTIVKYLWKQLKKVVPMRLISHFTIPN 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1618 612 SUPERFAMILY Ankyrin repeat 298 422 IPR036770 -
Aed2g1618 612 Gene3D - 17 181 IPR036770 -
Aed2g1618 612 Gene3D - 274 448 IPR036770 -
Aed2g1618 612 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 61 595 - -
Aed2g1618 612 Pfam Domain of unknown function 438 548 IPR026961 -
Aed2g1618 612 PANTHER CASKIN 61 595 - -
Aed2g1618 612 SMART ANK_2a 297 327 IPR002110 GO:0005515
Aed2g1618 612 SMART ANK_2a 331 360 IPR002110 GO:0005515
Aed2g1618 612 SMART ANK_2a 68 99 IPR002110 GO:0005515
Aed2g1618 612 SMART ANK_2a 108 137 IPR002110 GO:0005515
Aed2g1618 612 SUPERFAMILY Ankyrin repeat 60 163 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1618 Aed-Chr2 20393355 20401216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1618 299 551 Miscellaneous Gene Families AT3G09550 26.230 6.89e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1618 - - gmx:100788731 926.006