Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1615 ATGGCCGAATTCCTGGATCTCGAGTCCCAAGATGGCGTGCGAATGCCGTGGAACGTGATCCCCGGCACGAAGCAGGACGCCCTAAACGCCGTCGTTCCCGTCTCCGTCGTCTACACTCCCATAAAACACTTCCCCTCGATGCCCCTCCTTAACTACTCCCCTCTCCGCTGCCGCACGTGCCGCGCCGTCCTCAACCCCTTCTGCATCGTCGACTTCGCCGCCAAGATCTGGATCTGTCCCTTCTGCTTCCAGCGCAACCACTTCCCCCCTCACTACGCCTCCATCTCCGACGAGTCCCTCCCTGCCGAGCTCTTCCCGCAGTACACTACCGTCGAATACAACTCCGACACCGTCACTTCGTCCCCTCCCGCCACTGTTCCCCCCGTCTTCCTCTTCGTCGTCGACACGTGCGTCATCGAGGAAGAGATCGGGTTCCTCCGCTCGGCGCTGGCCCAGGCTGTGGAGCTTCTGCCGGATAATTCGCTCGTTGGACTCGTCACGTTCGGGACGTTTGTTCATGTTCATGAGTTGGGGTTCGGCGCCGTGCCGAAGACTTATGTTTTCAAGGGATCTAAGGATGTTACCAAGGACCAGCTGCTCGAGCGGATGAGCTTTTTCACCAAGAAGCCGCGGCCGGCAGTTGGCGTCGTCGCCGGCGCCAGGGACGGGCTCTCCACGGAGAGTATCTCGCGGTTCCTCGTGCCAGCGTCGGAGTGCGAGTTCACTCTCAATTCGGTATTGGAGGAGCTGCAGAAGGATCCTTGGGCAGTGCCGGCGGATCAGCGGGCGGCACGGTGCACCAGCACGGCGCTGAGTATCGCAGCGAGTTTGTTGGGGGCGTGCGTTCCTGGCTCTGCTGCAAGAATAATGGCGTTTATTGGAGGACCTGCTACTGAAGGACCTGCTCCTATTGTATCAAAACAACTTTCTGAACCAATTCGCTCCCACAAGGATGTGGATAAAGATTCTGTGCCACATTACCATAAATGTGTGAAATTCTATGATGGACTTTCGAAGCAGCTTGTACATCAAGGTCATGTACTAGATCTTTTTGCTTGTGCTCTTGATCAGATAAACTGCTCTAAGGACTTGAAAGTCCAAGGTATTATTGGCCCTTGTGCATCTCTTGATAAGAAAGGCCCATTGTGCTCAGATCTTGTTATTGGTCAAGGGGGTACAAGTGCATGGAAGATGTGTGGCCTTGACAAATCCACATCATTGTGTCTATTTTTTGATGTTGTGAGGAAGGAAAGTCCTGATGCAGCAATGCAGTCCACAAGCAATCAATTTTACTTCCAATTCCTGACTTATTATCAGAATAACAGTGGGCATATGAGATTACGGGTTTCGACCCTTTCACGTAGATGGGTTGCTGGACCAGAAAGTGTACAGGACTTGATTGCTGGATTTGACCAAGAAGCAGCAGCTATAGTCATGGCACGCCAAGTCTCTTTCAAAATGGAAACAGAGGCTGAATTTGATCCTATCAGATGGTTGGACAAGGCATTGATAAATTTGTGTTCTCGGTTTGGGGAATTTCAAAAAGACAGTCCATCTTCTTTCAGTTTGTCTCCCAGGTTCTCAATATTCCCTCAATTTATGTTTCATCTACGACGCTCTCAGTTTGTTCAGGTCTTTAACAACAGCCCAGATGAGACGGCTTACTTTAGAATGATACTGAACCGTGAAAATGTTACGAATTCTGTTGTCATGGTTCAGCCTTCGTTGATTTCTTATTCATTCCATAGTGGTCCTGAACCAGCTCTTCTTGATGTTGCAGCCATTTCGGCTGATAAGATCCTGCTTTTGGATTCATTTTTCACTGTTGTCATTTTTCATGGTTCAACCATTGCTCAGTGGCGTAAGGCTGGATATCATAATGAACCAGAACATCAGGCATTTGCACAATTGCTACAAGCTCCTCACGATGATTCAGATTCAATAATAAAGGAGAGGTTTCCTGCACCTCGCCTGGTTGTTTGTGATCAGCATGGCTCTCAGGCTCGATTTCTACTAGCAAAGTTAAACCCTTCTGCTACTTATAACACGGAATCTTATAATAATCCCGGAGGGGATATTATCTTCACCGATGATGTTAGCTTTGAGGTCTTCCTGGATCACTTACAGAGATTAGTAGTTCAATAA 2145 0.4937 MAEFLDLESQDGVRMPWNVIPGTKQDALNAVVPVSVVYTPIKHFPSMPLLNYSPLRCRTCRAVLNPFCIVDFAAKIWICPFCFQRNHFPPHYASISDESLPAELFPQYTTVEYNSDTVTSSPPATVPPVFLFVVDTCVIEEEIGFLRSALAQAVELLPDNSLVGLVTFGTFVHVHELGFGAVPKTYVFKGSKDVTKDQLLERMSFFTKKPRPAVGVVAGARDGLSTESISRFLVPASECEFTLNSVLEELQKDPWAVPADQRAARCTSTALSIAASLLGACVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDVDKDSVPHYHKCVKFYDGLSKQLVHQGHVLDLFACALDQINCSKDLKVQGIIGPCASLDKKGPLCSDLVIGQGGTSAWKMCGLDKSTSLCLFFDVVRKESPDAAMQSTSNQFYFQFLTYYQNNSGHMRLRVSTLSRRWVAGPESVQDLIAGFDQEAAAIVMARQVSFKMETEAEFDPIRWLDKALINLCSRFGEFQKDSPSSFSLSPRFSIFPQFMFHLRRSQFVQVFNNSPDETAYFRMILNRENVTNSVVMVQPSLISYSFHSGPEPALLDVAAISADKILLLDSFFTVVIFHGSTIAQWRKAGYHNEPEHQAFAQLLQAPHDDSDSIIKERFPAPRLVVCDQHGSQARFLLAKLNPSATYNTESYNNPGGDIIFTDDVSFEVFLDHLQRLVVQ 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1615 714 Pfam Sec23/Sec24 zinc finger 54 92 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Aed2g1615 714 Pfam Gelsolin repeat 585 671 IPR007123 -
Aed2g1615 714 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 358 714 IPR037364 -
Aed2g1615 714 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 1 358 IPR037364 -
Aed2g1615 714 Gene3D - 51 109 - -
Aed2g1615 714 Gene3D von Willebrand factor, type A domain 126 362 IPR036465 -
Aed2g1615 714 SUPERFAMILY Helical domain of Sec23/24 471 573 IPR036175 GO:0006886|GO:0006888|GO:0030127
Aed2g1615 714 SUPERFAMILY beta-sandwich domain of Sec23/24 4 470 - -
Aed2g1615 714 SUPERFAMILY Zn-finger domain of Sec23/24 45 114 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Aed2g1615 714 Gene3D Sec23/Sec24 helical domain 468 712 - -
Aed2g1615 714 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 574 714 IPR036180 -
Aed2g1615 714 Pfam Sec23/Sec24 helical domain 471 569 IPR006900 GO:0006886|GO:0006888|GO:0030127
Aed2g1615 714 Pfam Sec23/Sec24 trunk domain 126 359 IPR006896 GO:0006886|GO:0006888|GO:0030127
Aed2g1615 714 Gene3D Severin 573 677 IPR029006 -
Aed2g1615 714 CDD Sec23_C 563 683 IPR037550 GO:0030127|GO:0090114
Aed2g1615 714 SUPERFAMILY vWA-like 126 359 IPR036465 -
Aed2g1615 714 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 358 714 - -
Aed2g1615 714 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 1 358 - -
Aed2g1615 714 Pfam Sec23/Sec24 beta-sandwich domain 357 457 IPR012990 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1615 Aed-Chr2 20316152 20327038 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1615 K14006 - gmx:100791527 1340.48