Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1561 ATGTCTCGCCCTCCCAACTACGAGTTCCAGGAATGGTGGAACAAGCAGCGCGAAAAGAACAACAACCTCGACGTCCTCGACGACAGCAACAAAAAACATCAGCATCAACAACATCAACATCAACAACAGCAACACGACCACGCGCACGCCGGTTCTCCGCCGCAGTTCACGGCGCTGGACGTGGACTCCTCCGCCGCGAACTCCGCCTCCGACCGCTCCGTGGAGAAAGAGCGGTCTCGAAGTGCGCGGCAGCTCTCCTGGGTGTGCCTCCTGAAATTCCAGCAGCTGGCCGCGTCCCTCGGCTGGCTCTCCAACGGCCTCTTCATCCTCGCCCGCACCTCCCAGCGCCGGATCGCCGACTCCGCCTCGCTCCGCGGCGACAACTCGCGCCTCTACCGCGTGATCCGCGTCTTCCTCGTTGTAGTGATCGTCCTGTTAGGGTTCGAGCTCGTTGCATACTTCAAAGGCTGGCATTTCAGTCCGCCGGATCCAAGCGACGTCATCGGCGTCATCGGCGTGGTTTACGCCAAGTGGCTCGACGTCCGAGCCGCCTACCTGTCGCCTCCTCTCCAGAGCCTGGCGAATCTCTGCACCGTTCTGTTCATTGTCCAGTCGGTGGACCGCGTCGTTCTGATCCTCGGCTGCTTCTGGATCAAGTTCCGGAGGCTCAAGCCCGTCGCGAGCATCGACTACGAAGGCGAGGGCCACAGCGTGGAGGATTTTCCGATGGTGCTGGTTCAGATTCCCATGTGCAATGAGAGGGAGGTTTATCAGCAATCCATTGGAGCAGTTTGTATCATGGATTGGCCAAAGGAGAGAATGCTTGTGCAGGTTCTTGATGATTCTGATGAAGCAGATACCCAGCAGCTTATCAAGGCAGAAGTGCATAAATGGCAACAAAGGGGTGTTCGGATAATATATAGACATCGGCTTATACGTACAGGCTACAAGGCAGGGAATCTTAAATCAGCAATGGGCTGTGATTATGTTAAGGATTATGAGTTTGTGGCAATATTTGATGCTGATTTCCAGCCAACACCGGATTTCTTAAAGAAGACAGTCCCTTATTTCAAGTCTCGTTTGTGCAAGGCCAATATTTTAGAGCTGGAGCACATGCTACATAAACATATGCTGCTGAATAAAGAGTTTGGTCCCCATTTAATTGAGCATAGTAAGAAGAGCATGGAGGCAGTGTGTCAGAATTCAGTGAAGCAGAAGGCCTTTCTTGGACAAGAAAAGGTCACAAGAGAGAGGCCCTGTGATTTTATAGAAGATTACTGTTTGGGCTTAATTGGCCAAGCGGAATTAACTAAGGCCATGGAGGAGATCATGACTCATGAGGCTGGGAATATGGACCTAATGGAAGGAAGAAGATTTGCTTCAAGGTTACACTTTGGGGCATACATTTGCCACAACTTTATCTCATTGCTGGAGGCTTTCATGCCCAACAATCTGATAAGATCTCATTTTGGAAAGGATGATTTGGCATTAGTACAGGCAAGATGGGCATTTGTAAACAAGGATGAGAACTTGCTTACAAGATTGCAAAACGTCAATTTGTCTTTCCACTTTGAGGTGGAACAACAGGTGAATGGTATCTTCATGAACTTCTTTGGTTTTAATGGAACTGCTGGTGTCTGGAGAATAACGGCCCTTGAGGATAGTGGTGGTTGGTTGGAGCGAACAACTGTTGAGGACATGGATATTGCTGTTCGTGCTCATCTCTGTGGATGGAAGTTTATATTTCTCAATGATGTTAAGTGTCTTTGTGAACTTCCAGAGACCTATGAGGCATATAAGAAACAACAACACCGCTGGCATTCCGGTCCAATGCAATTGTTTCGCTTGTGTTTTTTCGATATACTTCGTTCAAAGGATAACATCTGGACCTGGTTTTCCTTGAGCCCAGACACAGCTCCCAGTGGGTCCAGTAATGTTAGTTGGTTAAAGAAGGTCAATTTGATATTTTTTTTCTTTCTCCTGAGGAAGCTTATCCTGCCATTTTATTCATTCACCCTATTCTGCATCATTCTTCCTTTGACCATGTTCCTTCCCGAAGCTGAGCTCCCAGCCTGGGTTGTTTGTTACATTCCTGGAGTCATGTCCATCCTAAGCATTCTCCCAGCTCCACGGTCATTTCCATTTTTAGTTCCTTACCTTCTATTTGAGAACACTATGTCGGTAACTAAATTTAATGCCATGATATCTGGATTACTCCGCTTTGGAAGTTCTTACGAGTGGGTGGTTACGAAAAAGTTGGGAAGATCGTCAGAGACAGATCTGATTGCCTTTGAGAAAGATTCTGAGCCTCTAATGCGATCTACTAGTCTTCATAGATCATCCTCAGATTCAGGCATCGGGGAACTAAGCAAACTAGAACTGTCAAAGAAAACCGGGAAGACCAAGAGAAATCGTCTCTTCAGGAAAGAACTTTATCTTGCACTTATTTTGTTGACTGCCTCAGTTAGAAGCTTATTATCTGCCCAAGGAATTCACTTCTACTTCCTATTATTTCAAGGGATAAGTTTTCTGGTTGTTGGTCTTGATTTGATTGGAGAGCAGGTTAGTTGA 2571 0.4737 MSRPPNYEFQEWWNKQREKNNNLDVLDDSNKKHQHQQHQHQQQQHDHAHAGSPPQFTALDVDSSAANSASDRSVEKERSRSARQLSWVCLLKFQQLAASLGWLSNGLFILARTSQRRIADSASLRGDNSRLYRVIRVFLVVVIVLLGFELVAYFKGWHFSPPDPSDVIGVIGVVYAKWLDVRAAYLSPPLQSLANLCTVLFIVQSVDRVVLILGCFWIKFRRLKPVASIDYEGEGHSVEDFPMVLVQIPMCNEREVYQQSIGAVCIMDWPKERMLVQVLDDSDEADTQQLIKAEVHKWQQRGVRIIYRHRLIRTGYKAGNLKSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTVPYFKSRLCKANILELEHMLHKHMLLNKEFGPHLIEHSKKSMEAVCQNSVKQKAFLGQEKVTRERPCDFIEDYCLGLIGQAELTKAMEEIMTHEAGNMDLMEGRRFASRLHFGAYICHNFISLLEAFMPNNLIRSHFGKDDLALVQARWAFVNKDENLLTRLQNVNLSFHFEVEQQVNGIFMNFFGFNGTAGVWRITALEDSGGWLERTTVEDMDIAVRAHLCGWKFIFLNDVKCLCELPETYEAYKKQQHRWHSGPMQLFRLCFFDILRSKDNIWTWFSLSPDTAPSGSSNVSWLKKVNLIFFFFLLRKLILPFYSFTLFCIILPLTMFLPEAELPAWVVCYIPGVMSILSILPAPRSFPFLVPYLLFENTMSVTKFNAMISGLLRFGSSYEWVVTKKLGRSSETDLIAFEKDSEPLMRSTSLHRSSSDSGIGELSKLELSKKTGKTKRNRLFRKELYLALILLTASVRSLLSAQGIHFYFLLFQGISFLVVGLDLIGEQVS 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1561 856 MobiDBLite consensus disorder prediction 20 62 - -
Aed2g1561 856 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 234 366 IPR029044 -
Aed2g1561 856 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 480 591 IPR029044 -
Aed2g1561 856 PANTHER - 489 627 - -
Aed2g1561 856 Pfam Glycosyl transferase family group 2 486 681 IPR001173 -
Aed2g1561 856 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 6-RELATED 489 627 - -
Aed2g1561 856 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 6-RELATED 46 360 - -
Aed2g1561 856 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 6-RELATED 644 855 - -
Aed2g1561 856 PANTHER - 644 855 - -
Aed2g1561 856 Pfam Glycosyl transferase family 2 247 359 IPR001173 -
Aed2g1561 856 SUPERFAMILY Nucleotide-diphospho-sugar transferases 244 694 IPR029044 -
Aed2g1561 856 MobiDBLite consensus disorder prediction 20 45 - -
Aed2g1561 856 PANTHER - 46 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1561 Aed-Chr2 19319499 19329553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1561 446 856 Miscellaneous Gene Families AT3G07330 72.048 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1561 - - gmx:100801779 644.81