Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1546 ATGGTAGAAAGACGAGTTTATTGCTCTGCCTCAACTCAATCACCACCACCAGCATGGCCAGGAACAGCTATTCCTGAACCTTCTGATTTCAAGACATGGAATGGCCCAAAATCTATTTCTATCTTGGTGGCTGAGTTTCCAGAAAGATTTAAAGTTGTGAGCCTTGCTGCTGGCTCTAATATCACTCTTCTTGCTGACCAGATTAAAACATTTAAGCCAGAAGTTGTTGGTCTCAGAAACGAGTCTTTAATTGATGAACTCAAAGAGGCTTTGGCTGATGTGGAAAACAAACCCGAAATCATCCCTGGAGAACAAGGAGTCATTGAAGCTGCTCGTCACCCTGATGCAGCCACTGTAGTTACTGGAATAGTTGGTTGTGCAGGATTAAAGCCAACAGTTGCAGCAATTGAAGCAGGGAAAGACATAGCACTGGCCAACAAAGAGACTATGATTGCTGGAGCCCCTTTTGTTCTTCCTCTTGCTCACAAACATAACATCAAAATTCTTCCCGCCGATTCGGAACATTCTGCAATTTTTCAGGTACTAAAAGAATGGCCTGCTGAAAAGATGAAAGACATTAAACTTGCTGATGCATTAAAACATCCTATATGGAGTTTGGGGAGAAAAATAACTATTGACTCTGCTACCCTTTTCAACAAGGATTCATCTGTTATTGCACAGTTGGGGATACCTGACATGCGCTTACCTCTCCTTTATACATTATCTTGGCCAGATAGAATCTATTGCTCTGAAATAACTTGGCCTCGCCTTGATCTTAGCAAGTATGGCTCTCTAACATTTTATGCGCCGGATGACAAGAAGTTTCCATCGGTGAATCTTTGCTATGCCGCCGGACGTGCCGGAGGCACCATGACAGGAGTTCTCAGTGCAGCAAATGAGAAAGCTGTAGAAATGTTTGTTGAAGAAAAGATTAGTTATCTGGACATATTCAAGGTTGTGGAACTAACATGCCAGGAACATCAAAAGGAATTAGTAGCATCTCCTTCACTAGAGGAAATTATTCACTATGACCAATGGGCACGACAATATGCCGCTAGTCTGCAAAAAGCTTCAAGTGTTTGA 1083 0.4238 MVERRVYCSASTQSPPPAWPGTAIPEPSDFKTWNGPKSISILVAEFPERFKVVSLAAGSNITLLADQIKTFKPEVVGLRNESLIDELKEALADVENKPEIIPGEQGVIEAARHPDAATVVTGIVGCAGLKPTVAAIEAGKDIALANKETMIAGAPFVLPLAHKHNIKILPADSEHSAIFQVLKEWPAEKMKDIKLADALKHPIWSLGRKITIDSATLFNKDSSVIAQLGIPDMRLPLLYTLSWPDRIYCSEITWPRLDLSKYGSLTFYAPDDKKFPSVNLCYAAGRAGGTMTGVLSAANEKAVEMFVEEKISYLDIFKVVELTCQEHQKELVASPSLEEIIHYDQWARQYAASLQKASSV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1546 360 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 148 231 - -
Aed2g1546 360 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 220 360 IPR003821 GO:0008299|GO:0030604|GO:0046872
Aed2g1546 360 Gene3D - 273 358 - -
Aed2g1546 360 Pfam DXP reductoisomerase C-terminal domain 228 349 IPR026877 -
Aed2g1546 360 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 2 220 - -
Aed2g1546 360 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase 42 153 IPR013512 GO:0070402
Aed2g1546 360 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 2 220 IPR003821 GO:0008299|GO:0030604|GO:0046872
Aed2g1546 360 SUPERFAMILY 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 261 354 IPR036169 -
Aed2g1546 360 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain 183 225 IPR013644 GO:0005515
Aed2g1546 360 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 220 360 - -
Aed2g1546 360 PIRSF Dxp_reductoisomrs 182 221 IPR003821 GO:0008299|GO:0030604|GO:0046872
Aed2g1546 360 PIRSF Dxp_reductoisomrs 220 360 IPR003821 GO:0008299|GO:0030604|GO:0046872
Aed2g1546 360 PIRSF Dxp_reductoisomrs 34 185 IPR003821 GO:0008299|GO:0030604|GO:0046872
Aed2g1546 360 Gene3D - 36 172 - -
Aed2g1546 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 42 172 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1546 Aed-Chr2 19130738 19137507 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1546 K00099 - gmx:100805316 656.751