Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1183 ATGCTACTATGGACATCTACATCATCACATTCAGCAAAGCGTATAATCTTTGCAGCGATATTCCTCCTTGGATTAGGGAGTAGTGGTCAAAAGCTTTCAGAAAATTTTCTCCGATATCAATTGCAAGAGAAAATGAAATCGAAGAAAGACCAAGACCAAAACCAGGACCACGCTGGTACAAAGAATATTCGTACCAATATTTGGTTGTTTGTTCCATCGGTTGTTGCCAATGCCATAACACTTTCAATTGTCATAACACTTTCAATTGCCATTAACTACGAGAGAATATTCAGAATCGCAGCACTTCTCATGGGAGGGACTTTTCTGTTGTTCCTCTTCGGTACTGCGTGGTATAGGCACCACGATTCTCTAATGGAGAGCAATCTACGCAAGATTTACAGAATCTGCAAAGCAGGTTTACTGAAAAGGAAATCAAAGTATCCAGACACAGGGAATTGCTATTACTGGAAGGATTACAAGCAGGACAGCCATTTGTATACACCAAAACACGACAAAGGACTAAGGTTGTATCCAAAAGTTCCTTGGCTATTCCAGTGGTTGGACAAAGCAGCTATAGTAGTTGTCGCTAATAATCCTGAAGCGAGTCCCGAGAATCAAGAAAAGAAGGGACAACTTTGCACGGTGAAGGAAGTGAGGGAAGTGAAGAGCCTCGTTCCTATGATTTACTTGTGCTTTGCCTTCTTTGCTCATAGTCTACTCATGTCCACTGGGAACACTTTCTTTATTTCACAAGCAAGCTGCTTGACGCAGGTTATTACCAATACCGATAACGATATATGGATTCTCATTGTGGCTGAGGATGTTGCGAATAGTATGTCACGGTTCATATGCTTTGTTATAAATTTCGCATTTCGATGCTTTGTGAAGTTAAAAGGTATGGATGGTAGGTCAAAGAGAAAAGCGGGGACAATCACAAGGATCAGTTTTGGCATGGTTTGTGCAGTAGTTTGCAGCCTCGTGGCGTGGAATGCTGAGAATCATAGATTAGGGATTATTAATAATGTCGAGGGGGACATTAAACAAGGCGGTGGGAACACGACAATGGCGGTACTTCCGCAGTTTGTGTTGCTAGGAATGACGGAGGGACTCGTTAATGGTGGGTTAGAGAGTTTGTTCCGAGGCCACGTGACAAAGTCGATGTGGAGTTTTGAGGATTCGTTTGTTGGATTAGTGTTTGGAATCGGCAAACTTTTCATTATACCATTTATCTTCACTGGCTGGGTCAAGAATACTATGAATAAAAGTCGTTTGGACAAACTTTATATGATGTTAGGAATATTGAACGAAATGTCTAGGTTCTATGGAAACCCTAATGAAGATAATGGGATTGTGGCTGCCTCAAATCAGGATGTTGATGCATCATTGGACATCGTGATTTAG 1401 0.4147 MLLWTSTSSHSAKRIIFAAIFLLGLGSSGQKLSENFLRYQLQEKMKSKKDQDQNQDHAGTKNIRTNIWLFVPSVVANAITLSIVITLSIAINYERIFRIAALLMGGTFLLFLFGTAWYRHHDSLMESNLRKIYRICKAGLLKRKSKYPDTGNCYYWKDYKQDSHLYTPKHDKGLRLYPKVPWLFQWLDKAAIVVVANNPEASPENQEKKGQLCTVKEVREVKSLVPMIYLCFAFFAHSLLMSTGNTFFISQASCLTQVITNTDNDIWILIVAEDVANSMSRFICFVINFAFRCFVKLKGMDGRSKRKAGTITRISFGMVCAVVCSLVAWNAENHRLGIINNVEGDIKQGGGNTTMAVLPQFVLLGMTEGLVNGGLESLFRGHVTKSMWSFEDSFVGLVFGIGKLFIIPFIFTGWVKNTMNKSRLDKLYMMLGILNEMSRFYGNPNEDNGIVAASNQDVDASLDIVI 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1183 466 Pfam POT family 69 397 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed2g1183 466 Gene3D MFS general substrate transporter like domains 1 441 IPR036259 -
Aed2g1183 466 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 2 434 - -
Aed2g1183 466 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 2 434 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1183 Aed-Chr2 10097306 10099537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1183 15 432 Organic Solute Cotransporters AT5G46050 23.448 1.10e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1183 - K14638 pvu:PHAVU_010G004300g 444.121