Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1179 ATGCAAGAGAACAATAACAGTTCCGAAACAAATACCTCACCTTCTCTTAAGAAGAAGAATCTATTCGTCTTCTTAAAAACCCTACCTTTCATTGGAGGTTTGGTTGTAAGCTACATATTTGTAGAATTTTCGGTGGTGTTGATGGATTATCTAACAGATTCAAGGGACTACAATCAGCGGGCAGCTGCTGTTGTTACGAATCTGCAAGATGGTCTATCATCTATCATTTTTGTTGTTGTTTCTAACATATCCGTAGGTTTAATGCTACTATGGACATCTACATCAACTTCGGCAGATGTTGTTGTCTATGCGGCGATATTCCTCCTTGCATTTGGGAAAAGTGGTCAAAATCTTTTAGAAAATTTTCTCAAACATCAGTTGTTAGAGAAAAGTAAAGAGAAAAATGAACAAGACCATGAGGGTACAATTCGTACTAATATTTGGTTGTTTGCTTCATCGATTGTTGGATTTATCATAACTGGTTATATGGCCTCTGAAGTTCACGATGAAACCTACGAGGACAGCTTTAGATTTGGGGCGATTCTCATGGGAGGGACACATATGTTGTTCCTCTTTGGTTGCAAGTGGTATAAAGAGTTAACTATTGAAAGCAATCTATGCCAGATTTATAGAATCTGCAAAGCAGCTTTTGGGAAACGGGATTCAAAGTATCCAACCTCGCCTAGTTCTTATTACTGGAGGGATTATAAGAAAAACCATTTCTATGATCAGCAAGGTGAAGGACTAAGGTTATCACCGCGAGTTCCGTGGCTATTCCGGTGGCTCGACAAAGCAGCGATAGTTAATTCAGAAGAAGGGCTGAGTCATGAGACGCAAGAAACGAAAGGGAAGCTTTGCGTGGTAAAGGAAGTGAGGGAAGTGAAGAGCCTTGTTCCTATGATCTACCTTGGCTTTACTTTTGTTGCTTTTAGTTTACTCGTGACCACTGGGAACATTTTCTTTGTTACACAAGCAAGCAACATGACATCAAATATTACTATCGATGGTAATGATATCCCTATTCTCCTTTTGATCAAGATGGGCATGAAACGTATATCCCAATTCATCTGCTTTATTATTAGGTTTGCGTTTCAACGCTTGAGAAAATTGAAAGATAGTGATGGTATTTCAAAATCGAAGAGGAAAGCCGCCGCAATTATAAGGATTGGTTTTGGCTTGATTTTTGCCATAATTTGTTGCCTCGTAGCATGGCATGTGGAGGTTCGTAGATTGAAGGTACATAAGGTGTACTTGGAACGGACCAGTAACTCAACTAGAAACTCGACTAGTAACTCAACCAGAAACTCGACGCGGGCTTTAATTCCACAATTTTCTTTGTTAGGAGTGACGGAAGGACTTGTTGAAGGTGGGTTAGCGAGTTTGTTCCAAGGCCACGTGGCAAATTCAATGCGGAGTTTTGAGGATTCGTTTAGTGAAATGGTGATTGGGACAGGCAAATTCCTCGTTATACCATTTGTGTTTAGTAACTGGATCAAGGAAACCTTCAATGCTAGCCGTTTGGACAATTACTATTTTATGTTGGGAATATTGAACGTTGTGTTCCTTGTTGGTTTTGCATACTACTCAATTAGATATGCATACATGGAAGAATATTCCGAGGATGAAAAAATGGACCAAACATTGGAACCAGACTCAGATGATTCCTCTGCGGAGAATGATAATGAAGCACCACAGCTAGAGGACCAATTAGGTAACAAAAGCTATTTTCTTTCCTTTTCATTTTATTCGGTTATTATGAATCTAATAGAACGAGTTTCTGTCTTGAATAAGTAA 1794 0.3919 MQENNNSSETNTSPSLKKKNLFVFLKTLPFIGGLVVSYIFVEFSVVLMDYLTDSRDYNQRAAAVVTNLQDGLSSIIFVVVSNISVGLMLLWTSTSTSADVVVYAAIFLLAFGKSGQNLLENFLKHQLLEKSKEKNEQDHEGTIRTNIWLFASSIVGFIITGYMASEVHDETYEDSFRFGAILMGGTHMLFLFGCKWYKELTIESNLCQIYRICKAAFGKRDSKYPTSPSSYYWRDYKKNHFYDQQGEGLRLSPRVPWLFRWLDKAAIVNSEEGLSHETQETKGKLCVVKEVREVKSLVPMIYLGFTFVAFSLLVTTGNIFFVTQASNMTSNITIDGNDIPILLLIKMGMKRISQFICFIIRFAFQRLRKLKDSDGISKSKRKAAAIIRIGFGLIFAIICCLVAWHVEVRRLKVHKVYLERTSNSTRNSTSNSTRNSTRALIPQFSLLGVTEGLVEGGLASLFQGHVANSMRSFEDSFSEMVIGTGKFLVIPFVFSNWIKETFNASRLDNYYFMLGILNVVFLVGFAYYSIRYAYMEEYSEDEKMDQTLEPDSDDSSAENDNEAPQLEDQLGNKSYFLSFSFYSVIMNLIERVSVLNK 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1179 597 Coils Coil 585 597 - -
Aed2g1179 597 Gene3D MFS general substrate transporter like domains 2 541 IPR036259 -
Aed2g1179 597 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 39 528 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed2g1179 597 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 39 528 - -
Aed2g1179 597 MobiDBLite consensus disorder prediction 543 561 - -
Aed2g1179 597 MobiDBLite consensus disorder prediction 543 564 - -
Aed2g1179 597 Pfam POT family 101 487 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1179 Aed-Chr2 10018974 10021791 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1179 99 515 Organic Solute Cotransporters AT2G37900 26.376 3.65e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1179 - K14638 gmx:106798051 569.311