Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1128 ATGATGGCATGCCAAAATTGGCCAGAGCCAGTGATTCGAGTCCAAGCCTTGGCTGAAAGTGGCTTAACCACAATCCCCGAACGTTTCATAAAGCCTGAGTCCCAAAGACCCACTAATAGTACTACTAACCCTACTTTTTCTCCAAAGGTCAATTCCTCTAAAATTGACCATAACCGTGAGAAACTCAACAACACAAATAACATCAACATCCCAGTGATCGACATGAAGCACGTGTATGGCAATGACGAGAGGCGGAGGGAGGAGGCACTCCGGCTTGTGTCGGAGGCATGCCGGGAATGGGGGTTCTTCCAGGTGGTGAACCATGGGGTGAGCCATGAGTTGATGAAGGGGATTAGGGAGGTGTGGAGGGAGTTCTTTGAGCAGCCACTTGAGGTGAAAGAGGTGTATGCCAATACACCACTCACTTATGAAGGGTATGGAAGTAGGTTGGGTGTGAAAAAAGGGGCCATTTTGGATTGGAGTGATTACTTCTTTCTCCATTACATGCCTTCTTCCCTTAGGGACCAAGCCAAGTGGCCTGCCCTCCCAACATCCTTAAGGAACCTAATCTCTGAATACGGTGAGCAAGTGGTTAAGCTAGGAGGAAGAATACTAGAGATACTGTCAACAAACCTTGGCCTAAGGGAAGATTTTCTCCTAAATGCATTTGGTGGTGAAGAAGATCTTGGTGCTTGTTTAAGGGTGAATTTCTACCCTAAGTGCCCTCAACCTGACCTCACACTTGGCCTGTCCTCTCACTCAGACCCTGGTGGCATGACCATTCTTCTCCCTGATGAAAATGTTTCTGGCCTTCAAGTTCGAAGAGGAGAAGATTGGATCACTATTAAGCCGGTTCCAAATGCCTTCATCATCAACATGGGTGCTGAGCAATGCAATTTACAAGAGCATAGAGCACAGGGTTATTGTGAACTCAGACAAAGATAG 945 0.4709 MMACQNWPEPVIRVQALAESGLTTIPERFIKPESQRPTNSTTNPTFSPKVNSSKIDHNREKLNNTNNINIPVIDMKHVYGNDERRREEALRLVSEACREWGFFQVVNHGVSHELMKGIREVWREFFEQPLEVKEVYANTPLTYEGYGSRLGVKKGAILDWSDYFFLHYMPSSLRDQAKWPALPTSLRNLISEYGEQVVKLGGRILEILSTNLGLREDFLLNAFGGEEDLGACLRVNFYPKCPQPDLTLGLSSHSDPGGMTILLPDENVSGLQVRRGEDWITIKPVPNAFIINMGAEQCNLQEHRAQGYCELRQR 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1128 314 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 295 - -
Aed2g1128 314 SUPERFAMILY Clavaminate synthase-like 10 294 - -
Aed2g1128 314 Pfam 2OG-Fe(II) oxygenase superfamily 231 296 IPR044861 -
Aed2g1128 314 MobiDBLite consensus disorder prediction 33 52 - -
Aed2g1128 314 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE 3 295 - -
Aed2g1128 314 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 228 314 IPR005123 -
Aed2g1128 314 MobiDBLite consensus disorder prediction 30 53 - -
Aed2g1128 314 Pfam non-haem dioxygenase in morphine synthesis N-terminal 70 180 IPR026992 -
Aed2g1128 314 Gene3D - 9 296 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1128 Aed-Chr2 9298000 9302338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1128 14 294 Glycosyltransferase AT5G59530 31.930 1.23e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1128 - - gmx:100809662 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1128 2 9298000 9302338 Aed2g1128 2 9298000 9302338 ECH