Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1109 ATGATGAAGCCTCCCAGTGGAAAGTTTCCTATCATCAAAATCTGTGTCCTTCTGTTCATAGTGTTGTTGTATGCAGAGTGTTTCAGTTCCCTATCTTCAAGTTCCATTTTCAAACCTTGTCCTACAAAAAGTACCAAGCCTAAATCCAATGTCTTATGTTGGGGTTGTCCAAAAGATGATGATGATAACAAGACACAAGAGGTGGTTCCTATTAATGCTTCATTATGGTTTCATGATGGATTCGTTTATGACCCTGAGGAGTGCGATTTTACCAATGGAAAATGGGTGTTTAACAGTTCAATAAAGCCTTTGTATTCAGACACAACTTGTCCATACATAAGTAGACCTTATTCTTGTGTCAAGAATGGGAGAGTTGATTCTGACTATCGCTATTGGGAATGGCAGCCAGAATATTGCACCTTGCCCAAGTTTAATCCAGAGCTAGCTCTCAAAAAGCTTCAAGGAAAGAGGCTGCTATTCGTAGGAGATTCACTGCAGAAAAGCCAATGGGAATCTTTTGAATATAATGCTACCATAGAATTCTATTGGGCACCAATGCTTGTGGAGTCCAACACTGAGTTCTTTACCATAAGGGATCCCAAGAAGCAGATAGTTAAAGTTGATGCAATCATGGATCGTGCCAAAAATTGGACTGGAGTGGATATTCTTGTATTCAATAGCTATGTATGGTGGATGAGTGACACTAGGGTTAAAGCACTATGGGGTTCATTTGCCAATGGAGAAGAAGGGTATGAAGAATTGGATGCACAAATTGCATACAACTTAGGTTTAAGGACATGGGCCAACTGGGTTGACTCTACTATTGATCCAAACAAAACCCAAGTCTTCTTCACAACCATGTCCCCAACACACACAAGGTTCTCTCTTAACTTTAAGCTTCAGCTTTCTTCTAGTTTTAACCTCCAAGTCAATTGTATTGTATCTTAA 948 0.3966 MMKPPSGKFPIIKICVLLFIVLLYAECFSSLSSSSIFKPCPTKSTKPKSNVLCWGCPKDDDDNKTQEVVPINASLWFHDGFVYDPEECDFTNGKWVFNSSIKPLYSDTTCPYISRPYSCVKNGRVDSDYRYWEWQPEYCTLPKFNPELALKKLQGKRLLFVGDSLQKSQWESFEYNATIEFYWAPMLVESNTEFFTIRDPKKQIVKVDAIMDRAKNWTGVDILVFNSYVWWMSDTRVKALWGSFANGEEGYEELDAQIAYNLGLRTWANWVDSTIDPNKTQVFFTTMSPTHTRFSLNFKLQLSSSFNLQVNCIVS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1109 315 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 174 302 IPR029972 -
Aed2g1109 315 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 141 173 IPR026057 GO:0016740
Aed2g1109 315 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 174 293 IPR026057 GO:0016740
Aed2g1109 315 Pfam PMR5 N terminal Domain 86 139 IPR025846 -
Aed2g1109 315 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 174 302 IPR029962 GO:0016413
Aed2g1109 315 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 12 173 IPR029962 GO:0016413
Aed2g1109 315 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 12 173 IPR029972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1109 Aed-Chr2 9081530 9084724 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1109 - - gmx:100816250 521.546