Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0977 ATGGCTAGCCTTAAGCTTGCATGTGTGGCTGCAGTGCTGTGCATGGTTGTGGTGAGTGCTCCCATTGCACATGCTGCGATCACGTGCGGGAATGTGGCGGTCACTGTCACTCCATGCATCGGTTACATCCGGGCCGGAGGAGCTGTGCCTTCAGCATGCTGTGACGGAGTCAAGAACCTCAACTCCGCCGCCAAGACCATCGCTGACCGCAAGACGGTCTGCAACTGCCTCAAACAAGCCGCCAACGCCATCTCTGGCTACAATGACAAGAACGCCGCCGCACTCCCTGGCAAATGTGGCCATCAAGTTTTGAAGTCACGGAAGCAGGGCACCGGAAACTACTCACTAGTGTATGAGTAG 360 0.5639 MASLKLACVAAVLCMVVVSAPIAHAAITCGNVAVTVTPCIGYIRAGGAVPSACCDGVKNLNSAAKTIADRKTVCNCLKQAANAISGYNDKNAAALPGKCGHQVLKSRKQGTGNYSLVYE 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0977 119 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 103 - -
Aed2g0977 119 Gene3D - 26 111 IPR036312 -
Aed2g0977 119 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 104 IPR036312 -
Aed2g0977 119 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Aed2g0977 119 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Aed2g0977 119 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Aed2g0977 119 PRINTS Plant phospholipid transfer protein signature 69 84 IPR000528 GO:0006869|GO:0008289
Aed2g0977 119 PANTHER - 1 103 IPR000528 GO:0006869|GO:0008289
Aed2g0977 119 SMART aai_6 29 114 IPR016140 -
Aed2g0977 119 CDD nsLTP1 27 100 - -
Aed2g0977 119 Pfam Protease inhibitor/seed storage/LTP family 29 103 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0977 Aed-Chr2 7697486 7698480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0977 4 103 Acyl Lipid Metabolism Gene Families AT2G38540 47.525 5.89e-25 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0977 - - gmx:100306510 136.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0977 2 7697486 7698480 Aed2g0977 2 7697486 7698480 ECH