Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0976 ATGGCTATTTTGCAAAGTAGGGTTGTTTTGATGGCCCTTATTGTGTGCCTGGTGGCTCTTGGTGCAACAACAAGAGCAGAGGTGACATGCGACCAAGTTGTGAACAACCTGACACCATGCATATCCTATGTGGTGTATGGTGGAGTGAATGTTCCAGCACAGTGCTGCAATGGGATAAGGGGGCTCTATGGCATGGCTCAGACCAAACTGGACCGCCAAGCTGTTTGTAACTGCATCAAGAATGCTGTTAGGAACAGTGGCTTCACTTACTCTAACTTCAACCTCAACCTTGCTGCTAACCTCCCCAAGAAATGTGGGGGTGCAGTGAGGTCGGTTGGTGCATGA 345 0.4928 MAILQSRVVLMALIVCLVALGATTRAEVTCDQVVNNLTPCISYVVYGGVNVPAQCCNGIRGLYGMAQTKLDRQAVCNCIKNAVRNSGFTYSNFNLNLAANLPKKCGGAVRSVGA 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0976 114 Gene3D - 27 112 IPR036312 -
Aed2g0976 114 CDD nsLTP1 28 106 - -
Aed2g0976 114 PANTHER - 7 106 IPR000528 GO:0006869|GO:0008289
Aed2g0976 114 SMART aai_6 30 110 IPR016140 -
Aed2g0976 114 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 10-RELATED 7 106 - -
Aed2g0976 114 Pfam Protease inhibitor/seed storage/LTP family 30 107 IPR016140 -
Aed2g0976 114 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 109 IPR036312 -
Aed2g0976 114 PRINTS Plant phospholipid transfer protein signature 50 64 IPR000528 GO:0006869|GO:0008289
Aed2g0976 114 PRINTS Plant phospholipid transfer protein signature 71 86 IPR000528 GO:0006869|GO:0008289
Aed2g0976 114 PRINTS Plant phospholipid transfer protein signature 29 45 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0976 Aed-Chr2 7685723 7687012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0976 13 106 Acyl Lipid Metabolism Gene Families AT2G15050 44.792 1.45e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0976 - - gmx:100793733 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0976 2 7685723 7687012 Aed2g0976 2 7685723 7687012 ECH