Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0960 ATGGCTTTAGGTGGTGGAACAGCTCCCCCAAGAGGAAGTGCAGCAGCTACTGCAAACATGAGGAGAAGGAGAACAGCTGGTGGTGCGCCCTCAGGAGGAGCAGCTGGAACTATGCTCCAATTTTACACTGATGATGCCCCTGGACTCAAGATCTCCCCAAATGTGGTTCTTGTAATGAGCATTGGCTTTATAGCATTTGTTGCCATCCTTCATGTGATGGGCAAGCTGTACTTTGTGCGTAGGGAGGCTTAG 252 0.504 MALGGGTAPPRGSAAATANMRRRRTAGGAPSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0960 83 PIRSF Sec61_beta 2 81 IPR030671 GO:0005784|GO:0006886
Aed2g0960 83 MobiDBLite consensus disorder prediction 1 36 - -
Aed2g0960 83 Pfam Sec61beta family 35 74 IPR016482 -
Aed2g0960 83 PANTHER SEC61 SUBUNIT BETA 5 82 IPR030671 GO:0005784|GO:0006886
Aed2g0960 83 PANTHER PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA 5 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0960 Aed-Chr2 7566663 7568622 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0960 K09481 - gmx:100500335 130.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0960 2 7566663 7568622 Aed2g0960 2 7566663 7568622 ECH