Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0891 ATGGCAAACTGTGTTTTCAGTTTATTATTTTTTGCTTTTTATATCATGCTGCTACCATCTGTTATTATTGGTACCAACATGACACCTTCTAACTCGTCAGCCATGAATAAGGAACGACAGGCTTTGCTCCAGAGCGGTTGGTGGAATCATTACCGAAATATCTCAGACCATTGTCATTGGGATGGTATCTCTTGTAATGAAGCTGGAAGTGTTACTAATATTTACCCAGGGTATTTGGATATTCCTCCATCTAAAGAACTGCGGCAGATTCAGCACTTGAACGTGACTGCCTTTCCAAATTTAGTCAAGCTAGACTTATATGGAATGGGTCTCATGGGAAGCATCCCTAGAGAAATAAGCCAACTTACAGAGCTTACCAATCTTGACCTATTCAATAATAAACTTCAAGGTTCAATCCCTTCTACTTTGAGTCGATTGGTGAATTTGACCTATCTTGATCTCCCTTTCAACAAACTTGAAGGTACCATACCAATAGAACTCGGGAATTTAACACAATTGGAGGAATTTGAACTCTCCAACAATTTACTCACCGGTTCAATTCCTCCTGCTTTAAGTCAACTGGTCAATTTGAACCATCTCGATCTCTCTTTCAACAAACTTGAAGGTACCATACCAATAGAGCTGTGGAATTTGACACAATTGAATATATTTGAACTCTCCAACAATTTACTCAACGGTTCATTACCATCAGAGATTGCAAAATCCACCAGTCTTTCGGTAGTAGACCTTTCTCACAACAACCTAACAGGAGATATAAATCCAGTCCTAAACTGTCCCTATGTCAGAAAAGTGAATTTAAGCTACAACGCATTTCACGGAAGCTTCGCTTACAAATTCATTTATGTCAACGACCTTGACCTCAGCCATAATTTTCTTAATGGCGATATTCCTCCTCGCTTCAGGATACCTTACATAGAAAGGTTGGATCTTAGTTATAACTATTTCACCGGTAGGCTTCTCATGAAACTTGCTCATATATCATATATAAACCTTTCATACAATTCCTTTGACTTCTCACAAAACCTTGACTATTGTTCTTTTAGTGAAGACTCTTTAATTAGTTACCACAGGCCAAATTTCACATACTGCGACTCTATCTACGACTCTGTTCCCCAAACCAATCCTCAAACTAGAAAAAATGCTCAAGATATAGTGCTTGTGGTAACATTAGCATTGGCATGCTTCTGTTCCAAACCAAAGTCTAGACCATCAATGCAGCAAGTGGCTCAAGAATTCTGTGCTTCCAAACTTCCCTCACCTTTGCCTTTCTATGAAATTTCAATTGCTCAGTTGATGACTCGAGATATCAACATAGAAATCTTGCAGGCAACAACTTAG 1359 0.3863 MANCVFSLLFFAFYIMLLPSVIIGTNMTPSNSSAMNKERQALLQSGWWNHYRNISDHCHWDGISCNEAGSVTNIYPGYLDIPPSKELRQIQHLNVTAFPNLVKLDLYGMGLMGSIPREISQLTELTNLDLFNNKLQGSIPSTLSRLVNLTYLDLPFNKLEGTIPIELGNLTQLEEFELSNNLLTGSIPPALSQLVNLNHLDLSFNKLEGTIPIELWNLTQLNIFELSNNLLNGSLPSEIAKSTSLSVVDLSHNNLTGDINPVLNCPYVRKVNLSYNAFHGSFAYKFIYVNDLDLSHNFLNGDIPPRFRIPYIERLDLSYNYFTGRLLMKLAHISYINLSYNSFDFSQNLDYCSFSEDSLISYHRPNFTYCDSIYDSVPQTNPQTRKNAQDIVLVVTLALACFCSKPKSRPSMQQVAQEFCASKLPSPLPFYEISIAQLMTRDINIEILQATT 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0891 452 Gene3D Ribonuclease Inhibitor 200 263 IPR032675 -
Aed2g0891 452 PRINTS Leucine-rich repeat signature 194 207 - -
Aed2g0891 452 PRINTS Leucine-rich repeat signature 125 138 - -
Aed2g0891 452 Pfam Leucine rich repeat 148 207 IPR001611 GO:0005515
Aed2g0891 452 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 40 146 - -
Aed2g0891 452 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 40 146 - -
Aed2g0891 452 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 95 305 - -
Aed2g0891 452 Gene3D Ribonuclease Inhibitor 264 370 IPR032675 -
Aed2g0891 452 Gene3D Ribonuclease Inhibitor 31 190 IPR032675 -
Aed2g0891 452 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 148 343 - -
Aed2g0891 452 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 148 343 - -
Aed2g0891 452 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 95 305 - -
Aed2g0891 452 SUPERFAMILY L domain-like 54 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0891 Aed-Chr2 6920740 6923461 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0891 106 373 Receptor kinase-like Gene Family AT5G56040 38.095 7.21e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0891 - - gmx:100789677 349.362