Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0889 ATGCAAATCTCAGGTTACAGTTCACTATTAGTGGCTATTATCTTTAGTAACTTCTTTTATGTCTTGTTCCTGCAAGGTGTTATAGCTAACACTATGGCAGCTTCTAATTCCTCATCCACAAATGAGGAACAAGAGGCTTTGCTTCAGAGCAAATGGGGCGAAGGCCGAAATATCTCAGAATATTGTAAATGGAATGGCATTGTGTGCAATGAAGCTCAAAGTGTTACTGAGATTTCAACTAGGAAATACTTTTATATTCTTCCAACAGAAGCCCATATCCAAAATCTCAATGTGTCTGCATTTCCTAATTTAATTCGTCTAGAGCTTAGTGCATTAGGACTCAAAGGAAACATCCCCAATGAAATAAGCTTTCTTAAGAAGCTTATCCATCTTGATTTGTCTTCTAATTTTCTTCAAGGTGAGTTGCCTAGTTCTCTTTTCAGTCTCACTCAACTAGAGACACTTAATATTTCTAACAATTTTCTTAGTGGTGTGATCCCTTCTACTTTGGGTCAATTGAAGAATTTGACCCGACTCTCCCTTGACTCAAACCAAATTGAAGGCCACATTCCAGAAGAACTAGGGAATTTAAGACGGTTGGAGCAGTTAACTCTTTCAAATAACTCACTCAATGGTTCAATCCCTTCTGCTTTAGAGCACTTGATCCATCTCAAAGTTTTGGATCTTTCTCATAATAAGATTTTTGGTGTTATACCAGAAGGGATATTTGTACTGACACAACTAACAAATGTTCAACTATCTTGGAATCAAATATCTGGTTCCATTCCATCTGGGCTTGAACAAATCCTAAGACTTGGAATTTTAGATATTTCCAACAATCAGCTTGAGGGATCTATCCCAGATGATTTTTTGAACCATTATTTTTATGTGAAGCTAAGCAACAACTCTTTAAGTGGAAGGATTCCTTCTCAAATAGGGAATATTTCATATCTAGATCTTAGTTATAATGACCTCACAGGCAACATACCTGAGGAACTTCATTCTGTGCTTCAACTTAATTTGTCTTACAATTCCTTTAATGCTTCAGATCACAGCGCGATGATGGCCGAGGATCTCGGCGTGGAGGCGAAGGAGGCCGCCGTTCGCGAGGTCGCGAAGCTGCTGCCTCTTCCGGAGCTTCTCCATTCGATCTCTTCCATCAAGGCTGATTACATTTCGCGCCAACAGGCCAATGATGCACAGCTTAGTACAATGGTTGCTGAACAGGTTGAGAAGTCACAGGCAGGACTAAAATCACTCTCCTTCTCTGAGAAGACAGTAAATCAGCTTCGTGAAAACTTTGTCTCCATTGAGAAGTTATGTCAGGAATGCCAAACATTAATTGACAACCATGAGCAGATAAAGATACTTAGCAATGCAAGAAATAACTTAAACACAACCTTGAAGGATGTTGAAGGTATGATGTCTATCTCTGTTGAGGCAGCAGAGGCTCGGGATTCTTTGACTGATGACAGAGAAATTGTCAACACTTACGAGAGGTTAACAGCTTTGGATGGAAAACGAAGATTTGCATTAGCAGCTGCGGGATCTCACAAGGAAGAGGTTGGAAGGCTAAGAGAATATTTTGAAGATGTAGATCGAACTTGGGAGAACTTTGAGAAAACACTATGGGGCCACATTTCCAATTTTTATAAACTCTCTAAAGAAAGCCCCCAGACTTTAGTTCGTGCTTTACGGGTTGTTGAAATGCAAGAGATCCTAGATCAACAGATTGCAGAAGAAGCAGCTGAGGCTGAAGGGGATGGTGCAATGGCACCACCAGTTGCAAATCCTCATAAGAGCAGCGGAAAATCTACAAGTTCAATGGCTTCTTCAAAAAATTTAACACAGCAAAAATTGAAGGTTCAAGGGAAAGGTTTTAAGGATAAATGCTATGAGCAAATAAGGAAGACTCTTGTGTTTGAGGACCTGAAAGCAGCTTTAGAGGAAGCACGAGCGATTGGGGAAGAGCTTGGAGATGTCTATGACTACGTAGCTCCCTGCTTTCCTCCAAGATACGAAATATTCCAACTAATGGTAAATCTGTACACTGAGAGGTTTATTCAGATGCTAAGATTGCTTAGCGACAGGGCAAATGAATTAACAAACATTGAAACACTAAAGGTAACTGGTTGGGTGGTTGAATTCCAAGATAATCTGATTGGGCTTGGAGTTGATGAGTCTCTAGCCCAAGTGTGCTCTGAGAGTGGTGCAATGGATCCTCTTATGAATTCTTATGTTGAGAGAATGCAAGCTACAACTAGGAAATGGTACTTGAATATTTTGGAGGCTGATAGAACACAGCCCCCAAAGAAAACTGAAGATGGGAAGCTATATACCCCAGCTGCTGTTGATCTCTTCAGGATACTTGGTGAGCAAGTACAAATTGTTCGGGATAATAGCACCGATCTCATGTTATACAGAATTGCCTTGGCAACCATTCAGGTGATGATTGATTTTCAAGCAGCTGAAAAGAAGAGCCTTGCAGAACCAGCTTCTGAAATTGGTCTGGAACCTTTATGTGCTCTGATTAACAACAATTTGCGCTGCTATGACCTTGCAATGGAGCTAAGTAATAGCACCATAGAAGCCCTTCCACAGAACTATGCTGAGCAGGTTAATTTTGAAGATACCTGTAAGGGTTTTCTTGAGGTAGCCAAGGAAGCTGTGCATCAAACTGTTAGTGTGATATTTGAAGATCCTGGTGTCCAGGAGTTGCTGGTGAAGCTATACCAGAAAGAATGGAGTGAAGGGCAGGTTACTGAGTATTTGGTTGCAACATTTGGTGATTATTTTGGTGATAAAAATTACATTAAGGAAGAAACTATTGAACGGATGAGGCTAGATGAGGAGGTTATCATGGATTTTTTCAGGGAACATATCAGTGTTTCTAAAGTTGAAAACAGAGTGAGTGTACTTAGTGACTTGAGGGAGCTTGCTTCAGCAGAGAGCCTGGATACCTTTACACTCATCTATACAAATATACTTGAACATCAACCTGACTGCCCGCATGAGGTTGTCGAGAAACTTGTTGGTCTAAGAGAAGGCATTCCTCGGAAGGATGCCAAAGAGGTCATCCAAGAGTGCAAAGAGATATACGAGAATTCACTTGTTGATGGAAAACCTCCTAAGGTTGGTTTTGTTTTCCGACGGGTGAAGTGCTTAACAGCATCCAAGGGAGGGATTTGGCGTAAACTCACTTGA 3204 0.4079 MQISGYSSLLVAIIFSNFFYVLFLQGVIANTMAASNSSSTNEEQEALLQSKWGEGRNISEYCKWNGIVCNEAQSVTEISTRKYFYILPTEAHIQNLNVSAFPNLIRLELSALGLKGNIPNEISFLKKLIHLDLSSNFLQGELPSSLFSLTQLETLNISNNFLSGVIPSTLGQLKNLTRLSLDSNQIEGHIPEELGNLRRLEQLTLSNNSLNGSIPSALEHLIHLKVLDLSHNKIFGVIPEGIFVLTQLTNVQLSWNQISGSIPSGLEQILRLGILDISNNQLEGSIPDDFLNHYFYVKLSNNSLSGRIPSQIGNISYLDLSYNDLTGNIPEELHSVLQLNLSYNSFNASDHSAMMAEDLGVEAKEAAVREVAKLLPLPELLHSISSIKADYISRQQANDAQLSTMVAEQVEKSQAGLKSLSFSEKTVNQLRENFVSIEKLCQECQTLIDNHEQIKILSNARNNLNTTLKDVEGMMSISVEAAEARDSLTDDREIVNTYERLTALDGKRRFALAAAGSHKEEVGRLREYFEDVDRTWENFEKTLWGHISNFYKLSKESPQTLVRALRVVEMQEILDQQIAEEAAEAEGDGAMAPPVANPHKSSGKSTSSMASSKNLTQQKLKVQGKGFKDKCYEQIRKTLVFEDLKAALEEARAIGEELGDVYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIETLKVTGWVVEFQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTRKWYLNILEADRTQPPKKTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDLMLYRIALATIQVMIDFQAAEKKSLAEPASEIGLEPLCALINNNLRCYDLAMELSNSTIEALPQNYAEQVNFEDTCKGFLEVAKEAVHQTVSVIFEDPGVQELLVKLYQKEWSEGQVTEYLVATFGDYFGDKNYIKEETIERMRLDEEVIMDFFREHISVSKVENRVSVLSDLRELASAESLDTFTLIYTNILEHQPDCPHEVVEKLVGLREGIPRKDAKEVIQECKEIYENSLVDGKPPKVGFVFRRVKCLTASKGGIWRKLT 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0889 1067 Gene3D - 934 1040 IPR042532 -
Aed2g0889 1067 Gene3D Ribonuclease Inhibitor 293 359 IPR032675 -
Aed2g0889 1067 MobiDBLite consensus disorder prediction 582 617 - -
Aed2g0889 1067 Pfam Leucine Rich Repeat 223 242 IPR001611 GO:0005515
Aed2g0889 1067 Pfam Leucine Rich Repeat 127 147 IPR001611 GO:0005515
Aed2g0889 1067 PANTHER BNACNNG07830D PROTEIN 934 1065 - -
Aed2g0889 1067 PANTHER BNACNNG07830D PROTEIN 354 934 - -
Aed2g0889 1067 MobiDBLite consensus disorder prediction 599 617 - -
Aed2g0889 1067 Pfam Exocyst complex component Sec6 939 1051 IPR010326 GO:0000145|GO:0006887
Aed2g0889 1067 Pfam Exocyst complex component Sec6 529 936 IPR010326 GO:0000145|GO:0006887
Aed2g0889 1067 Gene3D Ribonuclease Inhibitor 33 190 IPR032675 -
Aed2g0889 1067 Gene3D Ribonuclease Inhibitor 191 292 IPR032675 -
Aed2g0889 1067 PANTHER EXOCYST COMPLEX COMPONENT SEC6-RELATED 934 1065 IPR010326 GO:0000145|GO:0006887
Aed2g0889 1067 PANTHER EXOCYST COMPLEX COMPONENT SEC6-RELATED 354 934 IPR010326 GO:0000145|GO:0006887
Aed2g0889 1067 SUPERFAMILY L domain-like 90 346 - -
Aed2g0889 1067 Gene3D - 736 905 - -
Aed2g0889 1067 SMART LRR_typ_2 125 149 IPR003591 -
Aed2g0889 1067 SMART LRR_typ_2 269 293 IPR003591 -
Aed2g0889 1067 SMART LRR_typ_2 221 245 IPR003591 -
Aed2g0889 1067 SMART LRR_typ_2 197 220 IPR003591 -
Aed2g0889 1067 SMART LRR_typ_2 173 196 IPR003591 -
Aed2g0889 1067 Pfam Leucine rich repeat 151 210 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0889 Aed-Chr2 6864897 6884690 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0889 32 348 Receptor kinase-like Gene Family AT5G62230 34.807 3.77e-41 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0889 K06110 - gmx:100799529 1275.77