Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0874 ATGAGGAAAAGGAAAGGGAAGGAACAGGGTGACAAGGAGAAGCAACTTCTGCTTGAAAAAGCCATTAAGACATTGAATGAAAACACACTTCCAGAGTATGCATATCCTCTTTTGCTGTCTTCATGCAATATAAATCGGGATGAGACTATGAAGGAAAAGCGTAGGAGGGCTGTTCATTTATTAAAAGAAGGATTGGGGGGCTCATATGATGGGCTGTCTAAGAAACCTGAGACAGATGAGATTGATTTAGAGCAAGCTGATGAAGTCAAAGAAAATGCCATTCAAATTCAACCCATTAGATCAGAAGAAGTCTTAAATACAACATCAATTTCTTTGGAGTCCTCTCAAGATCCAGTTCATGGCAATGAAGTTGAAAATTATAAATATGTTTCTGAACACCCTGCTGACATTTCCATTGACAAGCAGCTCGATGAAATCAGAAGTTCTCCCATGTCTTGTTCTATTGATGAAATAAAAAGCACCAAGCCAAAGGATGATAGGACAGATGAGAACTGTAACACCAATGAATTGAGCAACCTTCCAGATTATTCTATACCAAGGCCTTCAAATGTTCCTACTGTTGTGCATGTGTATAGACCAACTGAGTTTCTTTATGAAGCTGGTTATGGTTCAAGTAAGGGTATTATTGGTGTTACTCAACCACGTCGGGTGGCTGTTCTTGCCACAGCTAAGCGTGTGGCATATGAGCTTGGTCTTCATCTAGGGAAGGAGGTTGGTTTTCAAGTCAGATATGACAAGAAGATTGGAGAAAGATGTTCTATCAAGTTCATGACTGATGGAATTTTGCTACGAGAAGTTCAGAATGATATTTTGTTGAGGCGTTATTCTGTCTTAATTCTTGATGAGGCTCACGAGAGGAGCTTGAACACAGACATTCTGATTGGGATGCTCTCACGTGTAATTAAAACTCGCCAAATGATTTATAATGAACAGCAGAAGATGATACTTTCTGGGGAAAGTATAAGTCCTGAAAAAATTGTTTTTCCATTAAAACTTGTGCTTATGAGTGCCACCTTGCGAGTACAAGACTTCACTTCTGGAAAGTTATTCCATACTCCTCCACCTGTGGTAAAAGTTCCTACAAGGCAATTTCCAGTGACAGCGTATTTCACAAAGAAAACAGAGAAAACAGATTACATTGGAGAAGCATATAAGAAGGTCTTGGCAATTCACAAGAAGTTGCCACCTGGGGGCATACTTGTCTTTGTTACAGGGCAAAGGGAAGTAGAGGACTTGTGCAGGAAGTTACGCAAAGCATCAAAGGAGTTTATCAGGAAAAAAGTTGCAGGGTCTGTGGAAACTGATAACACTGCAGTTCATGAAACAAGTTCTGTTGAGGGAGTAAATATTAACGAGATCAATGAAGCATTTGAGGTTCAGGGAAGTTCATCTATCCAGCAAACTGATAGATTTAGTGGTTATGATGAAGATGAGGATAATGTAAATTGGTATGAGTCTGATTTTTCTTATGATTCAGAAACAGAGAGTGAGTTGGAATTCAATGAAGATGATGATGATAATATTGAGCTTTCAGAGAGCAAAAGTAATATCGTGGATGTCTTGGGACAGGCAGGAAGTCTTGCTTCACTGAAGGCTGCTTTTGAAAAATTGTCTGGGCAAACCACATTAAGCTCCTCAAATGAAGAGAAGACACCAGTGAATATAGAAGGCAATTTAGATCAATCAAAAGTTTTCAGGGATCAAAGAGCTAAAGAAAATTGCAATACTCCAGGTGCATTCTGTGTTCTACCTCTGTATGCCATGCTTCCTGCAGCAGCTCAACTTCGTGTATTTGAAGAAGTCAGGGAGGGAGAGCGACTTGTTGTTGTTGCCACAAATGTTGCTGAAACATCTTTAACAATCCCAGGGATAAAATATGTGGTTGATACTGGAAGAGAAAAGGTGAAGAATTATGACCCCTCTAATGGCATGGAGACATATGAAGTGCAATGGATAAGCAAGGCATCTGCTGCACAGCGTGCAGGCAGATCTGGAAGAACTGGACCTGGACACTGTTACCGTCTCTATTCTTCTGCAGCCTTTAATAATGAATTCCCTGAGCACTCTCCTGCTGAAGTTGAGAAAGTACCTGTTCATGGTGTTGTCCTTCTCTTGAAATCCATGCATATTAAAAAGGTTGCAAACTTCCCATTTCCTACTTCTCTTAAAGCTGCTTCTCTGCTTGAGGCTGAGAATTGCTTGAAAGCTCTTGAAGCACTTGATAACAAGGATGAACTTACACTTATAGGAAAAGCCATGGCACATTATCCCTTGAGTCCTCGTCATTCTAGAATGCTTCTCACTGTTATTAAAAATACAAGACATGAGCATAAATGTAATCCAAATATGCTTTTGGCATATGCTGTAGCAGCAGCTGCAGCTTTGAGCTTGTCAAATCCTTTTGTAATGCAATATGAAGATGGTAGCAACAGAGATTCAGAGATGTCTGAGAAATCTAGTTTGGGAGACAGTGAGAAAGGCATTGATAAAAAAGAAAAGTCAAAGAAAAAGAAACTAAAAGAAACAGCTAAAGTTGCACGTGAAAAATTTCGAGTTGTCACTAGTGATGCCCTAACCATAGCTTATGCTTTGCAGTGTTTTGAACATTCACAGAAATCAGCAGAATTCTGTGACGACAATGCATTGCATTTCAAAACCATGGACGAAATGTCCAAACTTCGACAACAGCTACTTAAACTGGTCTTTTATCAAAGTGATAAAGGTGGCTTTGAAGAAGAGTACTCATTGACTCATGGAAGTATAGAAGATGTAGAACGTGCTTGGCAGGTTTCGTCTGAAAAATATCCACTTTCTCTGGTTGAGGAAAGGCTCATCTGTCAAGCAATATGTGCTGGCTGGGCAGATAGGGTTGCTAAACGTATTACAGCTTCTTCTAGGGCCTCTGATGGAGAGAAAACTTCTCATGCTTTAAAGTATCAATCAGGCATGGTTGATGAAAGTGTTTTCCTTCATCGTTGGTCATCAGCTTCCACTGTAGGCCCTGAGTTTTTGGTTTACAATGAACTAATAGAGACCAGAAGACCAAACAAAGAAGGGATAACAAGTGCCAAGAGAGCATATATGCATGGAGTAACAAGTGTAGAGCCAGCTTGGCTAGTTGAGCATGCAAAGTCTTCATGTGTTTTCTCTCCTCCCCTGATGGATCCTAGACCTTATTATGATGCCCAGACTGATCAAGTGAAATGTTGGGTAATACCAACCTTTGGGCGTTTCTGTTGGGAGCTTCCAAAGCATTCATTGCCCATTAGCGATGAAGAACATAGGGTGCAAGTGTTTGCCTATGCATTGCTTCAAGGCCAGGTGTGTCCATGTTTAAAATCTGCTCGAAAATGCATGTCAGCCCCCCCTGAAAGTATTATGAAGAGAGAAGCATTTGGTCAAAAAAGGGTGGGAAATCTTTTATGCAAGTTAAAGAGCAGGCTGATTGATAGCTCTGCTATGCTTAGAATGGTGTGGAAGGAGAATCCAAGGGAATTATTTTCAGAAATTTTGGATTGGTTTCAGCAGAGTTTTCACAAGCAATTTGAAGAGTTATGGTTACAAATGCACAATGAACTGCTTATGGAGAAACAAGAGCGCCCTCTGCATAAAAGTTCTAAAAAATCGAAAGGAAAATCTAAATCAATACAATAA 3675 0.4003 MRKRKGKEQGDKEKQLLLEKAIKTLNENTLPEYAYPLLLSSCNINRDETMKEKRRRAVHLLKEGLGGSYDGLSKKPETDEIDLEQADEVKENAIQIQPIRSEEVLNTTSISLESSQDPVHGNEVENYKYVSEHPADISIDKQLDEIRSSPMSCSIDEIKSTKPKDDRTDENCNTNELSNLPDYSIPRPSNVPTVVHVYRPTEFLYEAGYGSSKGIIGVTQPRRVAVLATAKRVAYELGLHLGKEVGFQVRYDKKIGERCSIKFMTDGILLREVQNDILLRRYSVLILDEAHERSLNTDILIGMLSRVIKTRQMIYNEQQKMILSGESISPEKIVFPLKLVLMSATLRVQDFTSGKLFHTPPPVVKVPTRQFPVTAYFTKKTEKTDYIGEAYKKVLAIHKKLPPGGILVFVTGQREVEDLCRKLRKASKEFIRKKVAGSVETDNTAVHETSSVEGVNINEINEAFEVQGSSSIQQTDRFSGYDEDEDNVNWYESDFSYDSETESELEFNEDDDDNIELSESKSNIVDVLGQAGSLASLKAAFEKLSGQTTLSSSNEEKTPVNIEGNLDQSKVFRDQRAKENCNTPGAFCVLPLYAMLPAAAQLRVFEEVREGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYDPSNGMETYEVQWISKASAAQRAGRSGRTGPGHCYRLYSSAAFNNEFPEHSPAEVEKVPVHGVVLLLKSMHIKKVANFPFPTSLKAASLLEAENCLKALEALDNKDELTLIGKAMAHYPLSPRHSRMLLTVIKNTRHEHKCNPNMLLAYAVAAAAALSLSNPFVMQYEDGSNRDSEMSEKSSLGDSEKGIDKKEKSKKKKLKETAKVAREKFRVVTSDALTIAYALQCFEHSQKSAEFCDDNALHFKTMDEMSKLRQQLLKLVFYQSDKGGFEEEYSLTHGSIEDVERAWQVSSEKYPLSLVEERLICQAICAGWADRVAKRITASSRASDGEKTSHALKYQSGMVDESVFLHRWSSASTVGPEFLVYNELIETRRPNKEGITSAKRAYMHGVTSVEPAWLVEHAKSSCVFSPPLMDPRPYYDAQTDQVKCWVIPTFGRFCWELPKHSLPISDEEHRVQVFAYALLQGQVCPCLKSARKCMSAPPESIMKREAFGQKRVGNLLCKLKSRLIDSSAMLRMVWKENPRELFSEILDWFQQSFHKQFEELWLQMHNELLMEKQERPLHKSSKKSKGKSKSIQ 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0874 1224 MobiDBLite consensus disorder prediction 156 184 - -
Aed2g0874 1224 Pfam Helicase conserved C-terminal domain 569 675 IPR001650 -
Aed2g0874 1224 Gene3D - 547 696 IPR027417 -
Aed2g0874 1224 SMART helicmild6 575 675 IPR001650 -
Aed2g0874 1224 CDD SF2_C_RHA 584 683 - -
Aed2g0874 1224 Gene3D - 199 369 IPR027417 -
Aed2g0874 1224 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 952 1051 IPR011709 -
Aed2g0874 1224 Gene3D - 726 882 - -
Aed2g0874 1224 PANTHER ATP-DEPENDENT RNA HELICASE 202 1206 - -
Aed2g0874 1224 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 283 292 IPR002464 -
Aed2g0874 1224 MobiDBLite consensus disorder prediction 1204 1224 - -
Aed2g0874 1224 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 536 716 IPR001650 -
Aed2g0874 1224 Gene3D - 370 472 IPR027417 -
Aed2g0874 1224 SMART ha2_5 736 868 IPR007502 GO:0004386
Aed2g0874 1224 Pfam Helicase associated domain (HA2) 737 866 IPR007502 GO:0004386
Aed2g0874 1224 MobiDBLite consensus disorder prediction 817 847 - -
Aed2g0874 1224 SMART ultradead3 173 376 IPR014001 -
Aed2g0874 1224 PANTHER - 202 1206 - -
Aed2g0874 1224 MobiDBLite consensus disorder prediction 815 847 - -
Aed2g0874 1224 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 203 364 IPR014001 -
Aed2g0874 1224 MobiDBLite consensus disorder prediction 158 172 - -
Aed2g0874 1224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 779 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0874 Aed-Chr2 6702984 6711208 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0874 K14780 - gmx:100788201 2126.67