Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0840 ATGATATCTCCAGCCTGGGCTGCTGCTTTTGCATCCCCACCTGCTGCAATGGCATTGTCTATGATTGCAGCCGGTACTTCAGGAGCAGAAAATCACGCTCCTTCATCAAATGCCCAGATTAGGCGTGAAACCTCATTGCTGGAACGGAAACATGCTAGACTTCATACATTTTCAAGCTTTCAAAAACCATCGGCAGTCACTAGCAAAGCACCACCCTTACCAAAGACCAAAGCAGCTGCAAAAGATGCTGCATTGGCAGCTGCTCGTGATCTTCAGCGGTTTTCAAGGATTGGTTCTGGAAGAGGTCTTAGTGCTGTTGCAATGGCTACATCAGCACAGCGAAGGACTGCTAGTGATATGGAGCGAGTTCAAAGGTGGAATATCACTGAAGCAATGGGAGTTGCCTGGATGGAATGTTTGCAACCAATCGATACAAAGTCGATTGACAGGAATGCTCGTGCAAGTATAATATGCCGGCATCATATCAGCACTGGAATTCATGCATGGCGTAAACTTGTTCGCCAGTTAATCGAGATGAGAAGTCTTTTTGGGCCTTTTGCTGATTATTTGTACAGCCCACTTCGTGTTTTCTGGAAGCTAGATTTTATGGAAAGTTCTTCCCGGATGAGAAGATGTATGAGAAGGAATTATCAAGGGTCTGATCATTTAGGTTCTGCCACGTATGACGATTATTCAGTGGAGAATAATGATCAGAGCACTCCAGTTTTATCTGCAGAAGCAATTAGAATAGAAGGTGTAGATGAAGATGAAGAACTAGCAGAAACTGGAAATTTGGATGTTAGAGTTGATGATGTTGAAGACAAAGTAGAGAATCAACCTAGATTTTCGAAAGCAGCTGAGCAAACTGCAAAAGAGTCATTGGAATCCTCTGCTATTCAACTTCAAAATGATGAGGGTGTTGTTCAGGGTTCTTCAGCCTTTGCACCCGGTTATGTTCCAAGTGAGCTTGATGAAAGAATTGTTATTGAGTTATCATCAACAATGGTCCAGCCACTCAAGGTTGTACAGGGAACCTTCCAAGTGACTAGTAGGAGGATAAATTTTATAGCTGATAACAATGAGATCAGCATGGATGACTTAAAATTTGGTTTTGAGGCACGGCGGGATGAAGAAAAGAATCGCAGCTGGTTATTATCTGCCCTTCATCAAATTTATAGTCGGAGATATCTTCTTAGAAGAAGTGCACTGGAGCTATTCCTGGTTGACCGTTCCAACTTCTTCTTTGACTTTGGGAGTAGCGAGGGGCGAAGAAATGCATATCAAGCAATTGTTCATGCTCAACCTCCATATTTAAACAACATATATTTAGCTACTCAGAGGCCTGGACAAATTTTGAAAAGAACCAAGCTTATGGAGCGTTGGGCTAGGTGGGAGTATCCAGTTTTCCCCTGGATTCTTTCTGATTACAGTTCAGAGAGCTTGGATCTTTCTAATCCTTCTTCTTACCGGGACCTTTCAAAGCCTGTTGGAGCAATAAACCCAGATCGTCTGGAAAAATTTCAAGAGAGATACAATAGCTTTGATGACCCTGTCATCCCTAAATTCCACTATGGATCGCACTACTCAAGTGCAGGAACAGTTTTGTATTATCTTGTTAGGGTTGAACCATTCACTACCCTTGCAATCAAACTACAAGGTGGAAAATTTGATCATGCAGATCGAATGTTTTCTGATATTTCTGCTACATGGAATGGAGTTCTTGAGGACATGAGTGATGTGAAGGAATTGGTTCCTGAGCTATTTTACCTCCCTGAGGTCCTCACAAATGAAAATTCAATTGATTTTGGCACAACACAATCGGGAGAAAAGCTTGATGCTGTAAAACTTCCTGCTTGGGCTGAGAATCCAGTTGATTTTGTGCACAAGCATAGGATGGCTCTGGAGAGTGAGTATAAGCAACAGGGCAAAGAGGCCATTGCAACAAATAATGTTTTCTTCTATATTACCTATGAAGGGACAGTGGATATTGATAAAATATCTGATCCAGTGCAACAGCGTGCCACACAAGACCAGATTGCTTATTTTGGACAAACACCATCCCAACTTCTGACTGTTCCTCACTTGAAGAGGAAGCCACTATCAGAAGTTCTGCAGTTGCAGACAATATTCCGCAACCCAAAAGCGATCAAACCATATGCTGTTGCATCCCCTGAGCACTGCAATCTACCAGCGGCTGCAATCCACGCATCTTCAGACATGGTTGTGGTTGTTGGTTTGAATGCACCAGCAGCTCAGGTTGCACAGCACAAGTGGCAACCCAACACACCTGATGGCCAGGGTACACCATTCCTCTTTCAACATGGAAAAGCTGCATCAGGCTCTGCTGGTGGGAATCTTATTCGCATGTTCAAAGGTCCTGCTGGGACTAGTGAAGAGTGGCATTATCCCCAAGCATTGGCTTTTCCTGTTCCTGGAATTAGAAGTCAAGCCATTGTTTCTATAACATGTAACAAAGAAATTATTACTGGTGGCCATGCTGATAATAGTATTAGGTTAATATCCTCGGATGGAGCTAAAACCTTGGAAACAGCCTATGCACACTGTGCTCCTGTAACTTGTCTTGGTCTTTCACCCAATAGTGACTACCTGGTAACAGGATCGCGAGACACAACAGTAATACTCTGGAGAATACATAGGGGGGCAGTTGCTTCTCGCTCAAGTACCGTAGGAGAATCTTCTTCCAGGAATGGCACGCTGCCTTCAACCAGCAGTAGCCCTGCATCACATTTGTTGTTAGACAAGAATCGTAGACGTTGTATTGAGGGTCCAATTCAGGTACTTAGGGGGCACCACAGTGAAATACTCAGTTGTTGTGTCAGCTCAGATCTTCGAATGGTTGTCTCGTGCTCCTACTCGTCAGATGTTCTCCTGCACTCGATAAGAAAGGGACGTTTAATCAGAAGGCTGGATGGTGTGGTGGCCAATACTGTCTGCCTTTCCTCTGGTGGGGTTATCATGACTTGGAATGAATCAGAGCATATTCTCAGTACCTATACTCTTAATGGTGTTCTTATTGCAAAAACAGAATTACCTTTCTCTGGCAACATTAGTTGCATGGAAATTTCTGTTGATGGGAGGAATGCTTTGATTGGAATTAATTCTCAAGAAAATGGTAGAGCCTATCATAACAGCAGTTGGAATCTGCAATCGAGTAAGTCAAATGTTGAAGAGTTTGGTTCCGAATCAGAAGAAACTCACGATAGCAACAAAATAAATGCTCCATCACCATCAATTTGCTTCCTGGATTTGCACACTTTGGAGGTAATTCATGTATTGAGGCTGAAAGAAGGACAGGATATCACAGCTCTTGCTCTAAATAAGGATAACACAAATCTTTTGGTTTCAACTTGGGATAAGCAATTGATTATCTTTACTGATCCAGCTTTGAGCTTGAAAGTGGTAGATCAAATGCTCAAGCTTGGTTGGGAAGGTGATGGGCTTAAGCACCTCATAAAATGA 3480 0.429 MISPAWAAAFASPPAAMALSMIAAGTSGAENHAPSSNAQIRRETSLLERKHARLHTFSSFQKPSAVTSKAPPLPKTKAAAKDAALAAARDLQRFSRIGSGRGLSAVAMATSAQRRTASDMERVQRWNITEAMGVAWMECLQPIDTKSIDRNARASIICRHHISTGIHAWRKLVRQLIEMRSLFGPFADYLYSPLRVFWKLDFMESSSRMRRCMRRNYQGSDHLGSATYDDYSVENNDQSTPVLSAEAIRIEGVDEDEELAETGNLDVRVDDVEDKVENQPRFSKAAEQTAKESLESSAIQLQNDEGVVQGSSAFAPGYVPSELDERIVIELSSTMVQPLKVVQGTFQVTSRRINFIADNNEISMDDLKFGFEARRDEEKNRSWLLSALHQIYSRRYLLRRSALELFLVDRSNFFFDFGSSEGRRNAYQAIVHAQPPYLNNIYLATQRPGQILKRTKLMERWARWEYPVFPWILSDYSSESLDLSNPSSYRDLSKPVGAINPDRLEKFQERYNSFDDPVIPKFHYGSHYSSAGTVLYYLVRVEPFTTLAIKLQGGKFDHADRMFSDISATWNGVLEDMSDVKELVPELFYLPEVLTNENSIDFGTTQSGEKLDAVKLPAWAENPVDFVHKHRMALESEYKQQGKEAIATNNVFFYITYEGTVDIDKISDPVQQRATQDQIAYFGQTPSQLLTVPHLKRKPLSEVLQLQTIFRNPKAIKPYAVASPEHCNLPAAAIHASSDMVVVVGLNAPAAQVAQHKWQPNTPDGQGTPFLFQHGKAASGSAGGNLIRMFKGPAGTSEEWHYPQALAFPVPGIRSQAIVSITCNKEIITGGHADNSIRLISSDGAKTLETAYAHCAPVTCLGLSPNSDYLVTGSRDTTVILWRIHRGAVASRSSTVGESSSRNGTLPSTSSSPASHLLLDKNRRRCIEGPIQVLRGHHSEILSCCVSSDLRMVVSCSYSSDVLLHSIRKGRLIRRLDGVVANTVCLSSGGVIMTWNESEHILSTYTLNGVLIAKTELPFSGNISCMEISVDGRNALIGINSQENGRAYHNSSWNLQSSKSNVEEFGSESEETHDSNKINAPSPSICFLDLHTLEVIHVLRLKEGQDITALALNKDNTNLLVSTWDKQLIIFTDPALSLKVVDQMLKLGWEGDGLKHLIK 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0840 1159 SUPERFAMILY BEACH domain 447 697 IPR036372 -
Aed2g0840 1159 ProSiteProfiles BEACH domain profile. 423 697 IPR000409 -
Aed2g0840 1159 CDD PH_BEACH 325 431 IPR023362 -
Aed2g0840 1159 MobiDBLite consensus disorder prediction 893 915 - -
Aed2g0840 1159 Gene3D - 325 430 IPR011993 -
Aed2g0840 1159 ProSiteProfiles Trp-Asp (WD) repeats profile. 851 892 IPR001680 GO:0005515
Aed2g0840 1159 Pfam Neurobeachin beta propeller domain 817 1032 IPR046851 -
Aed2g0840 1159 Gene3D BEACH domain 462 697 IPR036372 -
Aed2g0840 1159 PANTHER WD-40 REPEAT PROTEIN/BEIGE PROTEIN 147 1149 - -
Aed2g0840 1159 PANTHER WD-40 REPEAT PROTEIN/BEIGE PROTEIN 1 148 - -
Aed2g0840 1159 SMART WD40_4 927 966 IPR001680 GO:0005515
Aed2g0840 1159 SMART WD40_4 844 883 IPR001680 GO:0005515
Aed2g0840 1159 SMART WD40_4 1092 1132 IPR001680 GO:0005515
Aed2g0840 1159 Gene3D - 923 1141 IPR015943 GO:0005515
Aed2g0840 1159 SUPERFAMILY WD40 repeat-like 823 1132 IPR036322 GO:0005515
Aed2g0840 1159 PANTHER BEIGE/BEACH-RELATED 147 1149 - -
Aed2g0840 1159 PANTHER BEIGE/BEACH-RELATED 1 148 - -
Aed2g0840 1159 Pfam Beige/BEACH domain 465 697 IPR000409 -
Aed2g0840 1159 SMART Beach_2 458 697 IPR000409 -
Aed2g0840 1159 Pfam PH domain associated with Beige/BEACH 334 431 IPR023362 -
Aed2g0840 1159 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 851 884 - -
Aed2g0840 1159 Gene3D - 774 922 IPR015943 GO:0005515
Aed2g0840 1159 CDD Beach 466 697 IPR000409 -
Aed2g0840 1159 ProSiteProfiles BEACH-type PH domain profile. 322 431 IPR023362 -
Aed2g0840 1159 SUPERFAMILY PH domain-like 325 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0840 Aed-Chr2 6453659 6464827 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0840 - - gmx:100775259 1922.13