Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0820 ATGGCAGAAGAATCGCTCCCAAAAGTGCTTGTTCTGGGCGCCCCAAGGTGCTTCGCAACCCTCCAACCTCTCTACTCTCACAAGTTCAATTTCCTCAACCATCACCCTTTTTCAGGTCTCTTCTCGCTGCAACAATTCATGCATCTCCACAGCCACGACCCCGTCTCCATCCTCGCCGTTCTCTGCGGCGCCACCTACTCCGTCTCCACCGACGTCCTCCGCCTCCTGCCGGCGCTCCGCCTCGTCGTCACCACCAGCGCCGGAACCAATCACATCGACCTCGGCGAGTGTCGCCGCCGCGGAATCCAGGTCGCCGGCGCCGGAGGGCTGTTCTCCGAGGACGTCGCTGACATGGCCGTCGCTCTGCTCCTTGACGTAATGAGGAAAATCTCGGCGGCGGATCGGTATTTGAGAACGCAGAATCGCCACGATACGCTTTTGGATTTTTTCACTTTCGGCTCCAAGTTATCAGGTAAGCGAGTTGGGATTGTTGGACTGGGAAGCATTGGCATGGAAGTGGCAAAGAGGCTAGAGTCATTTGGTTGCATTATCGTATACAACTCTAAGCATAAAAAAGCTTCAGTTTCGTATCCTTTCTATTCTAGTGTTGTTGATCTTGCAACTACTTGCGATGCTCTTGTGTTATGCTGTGCACTGAATAAGCAAACAAGGCACATAATTAACAGGGAAGTGATTTTGGCATTAGGAAAAGGAGGGTTTGTTGTGAATGTTGGAAGAGGGGGTCTTATTGATGAAAAGGAATTGGTTAAGTGTTTGATGGAAGGTGAAGTTGGAGGTGCTGGTTTGGATGTGTATGAGAACGAGCCTCATGTTCCTCAAGAGCTCCTTCAAATGAATAATGTGGTTTTGTCTGCACATGCTGCTGCTTTTACTGCGCAATCTTTGATGGATTTGTGTGACCTTATGGGAGGGAATTTAGAAGCCTTCTTCTCAAATAAGCCCCTCATTACTCCAGTTATCAAAGTGCCTCTGCCAGTGCATTTCAAACTCTGTTTTGATGTCTACGGCTCTACGCCCATCTGTTGTGCCCAAACTATTAGAAATCCTAAGCGCTTTGTGTCGTTGTGCCTCTCGCTGGCGCCATTGAAGTTCTGTGCCACCATTCAAGTTTCTCTTCTCCTCAATCTCTCGTTCCCCCTCTTCCTCGCCAGCGCACGAATGTTCTACTTTCCTGGAGCTCAATCATCAATGGCAATGGAAGACAAGAACAGCCACAATGATAACAATAAGGAGCTTCAACCACTCCTTGTGCTTGGTCCTCCACCAATCTTACCAATTTTTGAAGCTCAAAACATTCACAAGTACCATTTCCTCAAAGCTTTCTCCTCACAACTCCCTCTCCACCAATTCCTCACCAAGCAAAAGGTTGACCCTTCATCCATTCAAGCCATACTCTGCAACCCTTCACAGCAGATCTCTTCAGATATCATCCGGCTCCTCCCGTCGCTCCACATCATTGTGACCACCAGTGTTGGAACCGATCACATAGACTTGCCTGAGTGCAGCCGCCATGGTATTCAGATTGTCTGTGTTGCAGGAGATCAAGCCATGGATGTTGCTGACATGGCTATTGGGTTGTTGATCGATGTTATGTCGAAAATTTCAGCGGCTGATCGACATGTTAGGAAATGGGGTCCTTCTATTCCATTGAATCTTTCTTTTGGTTCCAAGCTAAAAGGCAAGCGAGTGGGGATTGTTGGATTGGGAAAAATTGGCAAAGAAGTTGCTAAAAGGCTTGAGGCCTTTGATTGCAGAATTTTGTACCATTCAAGAAACGAGAAGCCAATTATTGCTTACACTTTTTACTCTAATGTTGTTGAGCTTGCTGGTAATAGTGATGTTATTGTGCTTTGTTGTCCATTAAATGAGCAAACAAGGCACATGATCAACAGGGAAGTGATGTTGGCATTGGGGAAAGATGGTATTATTGTAAATATTGGACGTGGAGCTCTAATTGATGAAAAGGAATTGGTGAAATGTTTGATGGAAAAGGAGATAAAGGGTGCTGGCTTGGATGTGTTTGAGAATGAGCCTAATGTTCCCAAAGAGCTCTTTCCATTGGATAATGTTGTCCTCTCTCCACATGCTGCTTCATTTACTGAAGATCTTTTCACTGAAGCATGTGAACTTGTAGCAGAGGCTCTAGAAGTGTTCTTTTCAAGTAAACTATAG 2193 0.4642 MAEESLPKVLVLGAPRCFATLQPLYSHKFNFLNHHPFSGLFSLQQFMHLHSHDPVSILAVLCGATYSVSTDVLRLLPALRLVVTTSAGTNHIDLGECRRRGIQVAGAGGLFSEDVADMAVALLLDVMRKISAADRYLRTQNRHDTLLDFFTFGSKLSGKRVGIVGLGSIGMEVAKRLESFGCIIVYNSKHKKASVSYPFYSSVVDLATTCDALVLCCALNKQTRHIINREVILALGKGGFVVNVGRGGLIDEKELVKCLMEGEVGGAGLDVYENEPHVPQELLQMNNVVLSAHAAAFTAQSLMDLCDLMGGNLEAFFSNKPLITPVIKVPLPVHFKLCFDVYGSTPICCAQTIRNPKRFVSLCLSLAPLKFCATIQVSLLLNLSFPLFLASARMFYFPGAQSSMAMEDKNSHNDNNKELQPLLVLGPPPILPIFEAQNIHKYHFLKAFSSQLPLHQFLTKQKVDPSSIQAILCNPSQQISSDIIRLLPSLHIIVTTSVGTDHIDLPECSRHGIQIVCVAGDQAMDVADMAIGLLIDVMSKISAADRHVRKWGPSIPLNLSFGSKLKGKRVGIVGLGKIGKEVAKRLEAFDCRILYHSRNEKPIIAYTFYSNVVELAGNSDVIVLCCPLNEQTRHMINREVMLALGKDGIIVNIGRGALIDEKELVKCLMEKEIKGAGLDVFENEPNVPKELFPLDNVVLSPHAASFTEDLFTEACELVAEALEVFFSSKL 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0820 730 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 570 597 IPR029752 -
Aed2g0820 730 Gene3D - 465 728 - -
Aed2g0820 730 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 531 704 IPR006140 GO:0051287
Aed2g0820 730 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 120 295 IPR006140 GO:0051287
Aed2g0820 730 CDD HPPR 420 727 - -
Aed2g0820 730 PANTHER D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN-RELATED 4 326 - -
Aed2g0820 730 PANTHER D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN-RELATED 417 729 - -
Aed2g0820 730 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 467 550 - -
Aed2g0820 730 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 60 326 IPR006139 GO:0016616|GO:0051287
Aed2g0820 730 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 417 729 - -
Aed2g0820 730 Gene3D - 523 707 - -
Aed2g0820 730 Gene3D - 112 298 - -
Aed2g0820 730 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 4 326 - -
Aed2g0820 730 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 524 705 IPR036291 -
Aed2g0820 730 Gene3D - 56 321 - -
Aed2g0820 730 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 112 296 IPR036291 -
Aed2g0820 730 CDD HPPR 7 318 - -
Aed2g0820 730 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 452 726 IPR006139 GO:0016616|GO:0051287
Aed2g0820 730 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 59 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0820 Aed-Chr2 6332487 6339139 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0820 - K15919 gmx:100776772 529.635