Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0799 ATGCCACCATGTTTATGTGATCATAGTGTTGGAACCAACACAATTTCTAATGTGATAAATTATGGTGCTAAGGGAGATGGCACGTCAGATGATTCACAAGCATTTCTAAGAGCATGGCAAAGCACGTGTAGAACAAAAGGGACATCAACTCTATTAATACCACCAAACAAAGTATTCATGGTGACGAGCTTAATCCTAAAGGGTCCTTGCTCTGCCACAAGTATTCAAATTCAGCTCCAAGGGAAAATAGTTGCACCTGCAAAAGATGGATGGGTAGGATATAAGTATACTTGGATTTTGATCTCAAATGTAAATGGTCTCACAATTGATGGAAGTGAAGGATTACTAGATGGCTCTGGTAATACTTGGTGGCCATGCAAAGTTCTCGCTTTCCAATCATGCAATCATTTTAGTGTTAGTCACTTGAAGATCATTAATAGTCCAAAAGCTCACATATGCATAAATCAATGTCAGGGTGCTACATTCTCTAATATTAACATTCAAGCTCCTGGTACTAGTCCCAACACAGATGGAATTGACATTAATAATTCTCAGAATATCATAATAAAAGATTCCATTATAGCATCTGCATTGGCAGCCTGGGTAAAAAAATATGATACAATCGAGGATGTTGATGTACGAAATTGCAGCTTCACGGGCACTACAAATGGAGCTAGAATCAAGACAATTCCAGGTGGATTAGGTTATGCAAAAAGAATAACTTTTGAAAAAATCACGTTTGATCAGGCTCGCAACCCAATAATTATAGACCAACTCTATGGTGATTATGAACATATGTCATTTTTAACGAATGGAGACGTCCAAGTGAATGAGGTAACATTTCGTGGATTTGAAGGAACGTGTACATATGATAAAGCTATTGTCTTAAATTGCAGTCCATTAGGTTGTTTCAACATTACATTGGATCAAAATAACATTGTCTCTTCTCAAGGAAAGCAAGTTGAGGCTGGAAGTGCTTGTTTCCACCAACTCAGGGTTCTGGCTGAAAATAATATTATGGATTCATTTTCCTCTCTTTTCATCAACAAATCCACTAATTATACATTTTGA 1071 0.3697 MPPCLCDHSVGTNTISNVINYGAKGDGTSDDSQAFLRAWQSTCRTKGTSTLLIPPNKVFMVTSLILKGPCSATSIQIQLQGKIVAPAKDGWVGYKYTWILISNVNGLTIDGSEGLLDGSGNTWWPCKVLAFQSCNHFSVSHLKIINSPKAHICINQCQGATFSNINIQAPGTSPNTDGIDINNSQNIIIKDSIIASALAAWVKKYDTIEDVDVRNCSFTGTTNGARIKTIPGGLGYAKRITFEKITFDQARNPIIIDQLYGDYEHMSFLTNGDVQVNEVTFRGFEGTCTYDKAIVLNCSPLGCFNITLDQNNIVSSQGKQVEAGSACFHQLRVLAENNIMDSFSSLFINKSTNYTF 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0799 356 SUPERFAMILY Pectin lyase-like 9 322 IPR011050 -
Aed2g0799 356 PANTHER - 203 327 - -
Aed2g0799 356 PANTHER - 11 196 - -
Aed2g0799 356 PANTHER PECTIN LYASE SUPERFAMILY PROTEIN 11 196 - -
Aed2g0799 356 SMART pbh1 237 258 IPR006626 -
Aed2g0799 356 SMART pbh1 208 229 IPR006626 -
Aed2g0799 356 SMART pbh1 271 293 IPR006626 -
Aed2g0799 356 SMART pbh1 157 183 IPR006626 -
Aed2g0799 356 PANTHER PECTIN LYASE SUPERFAMILY PROTEIN 203 327 - -
Aed2g0799 356 Gene3D - 7 352 IPR012334 -
Aed2g0799 356 Pfam Glycosyl hydrolases family 28 43 195 IPR000743 GO:0004650|GO:0005975
Aed2g0799 356 Pfam Glycosyl hydrolases family 28 205 317 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0799 Aed-Chr2 6030245 6034974 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0799 8 320 Glycoside Hydrolase AT5G44840 36.056 1.40e-67 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0799 K01184 - gmx:100801217 462.996