Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0748 ATGGGTGCTAGTTTTTCCTCTTGTGTTTGTGATGGTGATGCTACCCCTTTGAGGCCAAGGCTTGGGGACATACCAGAGAGTTGCGTTGCATTAGTGTTGATGTATTTGGACCCACCGGAAATCTGCAAGCTTGCAAGATTGAACAGGGTGTTTCGTGATGCTTCCTTGGCGGATTTCATATGGGAATCGAAGTTGCCTTTGAATTATAAGTTCATTATGGAGAAAGCTTTGAAGGATGATGCTTCTGAAATTTGGCTAGATAAGAGGACGGGTGGGGTGTGTTTGGCGATTTCTTCCCAAGCGTTAAGGATTACAGGGATAGATGATCGGAGATATTGGAGCCGCATTTTGACTGAAGAATCAAGATTCCATACAGTTGCTTATCTTCAACAAATTTGGTGGCTTGAAGTGGAATGTGATATTGATTTTCAATTTCCACCTGGGACATACAGTGTGTTCTTTAGACTGCAGCTTGGCAGATCATCCAAGAGATTGGGCCGTCGAGTTTGTAAAACGGATGACATTCATGGCTGGGATATAAAACCTGTAAAATTTCAGCTAACAACTTCTGATGGTCAACATGCTGTATCCCAAAGTCATTTGGATAATCCAGGGCAATGGGTTCTCTACCATGCAGGAAACTTTGTTTCCAAGAGTCCTAATGATCTGATGAAGATCAAATTTTCATTGACTCAAATTGATTGCACACATACCAAAGGTGGTTTGTGTGTAGATTCTGTATTTATATGCAATAGTGATGTAAAAAAAGAGGTGTAG 777 0.4131 MGASFSSCVCDGDATPLRPRLGDIPESCVALVLMYLDPPEICKLARLNRVFRDASLADFIWESKLPLNYKFIMEKALKDDASEIWLDKRTGGVCLAISSQALRITGIDDRRYWSRILTEESRFHTVAYLQQIWWLEVECDIDFQFPPGTYSVFFRLQLGRSSKRLGRRVCKTDDIHGWDIKPVKFQLTTSDGQHAVSQSHLDNPGQWVLYHAGNFVSKSPNDLMKIKFSLTQIDCTHTKGGLCVDSVFICNSDVKKEV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0748 258 PANTHER F-BOX PROTEIN PP2-A13 79 258 - -
Aed2g0748 258 PANTHER F-BOX PROTEIN PP2-A13 1 78 - -
Aed2g0748 258 Pfam Phloem protein 2 93 249 IPR025886 -
Aed2g0748 258 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Aed2g0748 258 SUPERFAMILY F-box domain 18 74 IPR036047 GO:0005515
Aed2g0748 258 PANTHER F-BOX PROTEIN PP2-A15 79 258 - -
Aed2g0748 258 PANTHER F-BOX PROTEIN PP2-A15 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0748 Aed-Chr2 5438318 5441007 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0748 - - gmx:100789493 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0748 2 5438318 5441007 Aed2g0748 2 5438318 5441007 ECH
Aed6g1326 6 17986927 17989446 Aed2g0748 2 5438318 5441007 ECH